| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2748 |
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| Symbol | |
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| ID | 5870536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3082091 |
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| End bp | 3082918 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641547869 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001668981 |
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| Protein GI | 167033750 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.710224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.547763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA ATAAGATTGC CTCTCAGTGG CTGGGCCTGG ACTCGGCCGT ATGCGTGGTA
ACCGGCGCCG CCGGCGGCAT TGGTGCCGCG CTGGCCGCAG CCTTGGTGGA GCAGCAGGCC
CACGTGGTGC TGCTGGACCG CGACCTGGAC AAATGCCGCG AACTGGCGGC CACCTTGGGT
GAGCACAGCA CGGGCGAAGT CAGCGCCCTG GCCTGTGACA TTGCCGACCC GGCCAGCGTG
GGGCAAGCGG CTGCCCAGGT GCAGGCACTG CATGGGCGCT GCGATGTGCT GGTCAACAAT
GCCAGCGTGC TGCGCCCCGG CGCGCTGGAC ACGCTGAGCC TGGAGCAATG GAACCAGGTG
CTGGCGGTCA ACCTCAGCGG CTACCTGTTG TGTGCCCAGG CCTTCGGCCG CTCGATGCTG
GCTCGCGGCC AGGGCCGCAT CGTGCATGTA GCCTCGATTG CCGCCCATTA CCCGCAACCC
AACAGCGGTG CCTACAGCGC GGCCAAGGCT GGCGTGAGCA TGCTGTCGCG GCAGCTTGCC
GTGGAGTGGG GGCCGCGGGG TGTGCGCAGC AACGCCGTGT GCCCGGGCTT GATCCGCACG
CCCTTGTCGG CGGCGTTCTA TGCCGACCCG CAGGTGGAAC GCCAGCGTAG CGCCATGACC
GCCAACCGTC GCATTGGTGA GCCGCTGGAT ATCGCCGAGG CCGTGCTGTT TCTGGCCAGC
CGCCGCGCCG ACTATATCAA CGGCGCCGAG CTGACCGTGG ATGGCGGGCT GGAGTGCATG
CCCATGGCAT TGATCCCGCG CCCGGGCTTC GAGGGGGCTG GCCAATGA
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| Protein sequence | MNNNKIASQW LGLDSAVCVV TGAAGGIGAA LAAALVEQQA HVVLLDRDLD KCRELAATLG
EHSTGEVSAL ACDIADPASV GQAAAQVQAL HGRCDVLVNN ASVLRPGALD TLSLEQWNQV
LAVNLSGYLL CAQAFGRSML ARGQGRIVHV ASIAAHYPQP NSGAYSAAKA GVSMLSRQLA
VEWGPRGVRS NAVCPGLIRT PLSAAFYADP QVERQRSAMT ANRRIGEPLD IAEAVLFLAS
RRADYINGAE LTVDGGLECM PMALIPRPGF EGAGQ
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