| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2745 |
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| Symbol | |
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| ID | 5870533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3078669 |
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| End bp | 3080018 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547866 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668978 |
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| Protein GI | 167033747 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.382719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.460456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA CGCTCGACGT GCGCCAACTG ATCGACCAGC AACCCATCGG CCGCTACCAG
AAATGGGTGG TGTTCCTCGG CTTTCTCATC ATTGCGTTGG ATGGCCTGGA CGTCGCCATC
ATCGGCTTCA TTGCCCCACA ACTGAAAAGC GATTGGCACC TGGGTGCGCA AAGCCTGGGC
CCGGTTTTGA GCGCCGCGCT GATCGGCCTG GCGCTTGGCG CGCTGATTGC CGGGCCCCTG
GCGGACCGCT ACGGGCGCAA GGCGGTGCTG CTGTACAGCG TGCTGCTGTT CGGCATCTGG
ACCTTGGCCT CGGCCTTTTC ACCCAACTTG GAAACCTTGG TTGCGCTGCG CTTTCTCACG
GGCCTGGGCC TGGGGGCGGC CATGCCCAAT GCCAGCACCT TGGTCAGTGA ATACGCCCCA
GCACGCAGCC GCTCACTGCT GATTACCCTG GCGTTCTGCG GGTTCTCCCT GGGGGCGGCG
ATGGGTGGGT TCGTCAGCGC CTGGATGATC CCCAACCTGG GGTGGCGCAG TGTTCTGGTG
CTGGGTGGGG TGTTGCCGCT GCTGGTCCTG CCGTTGCTGT ATTGGCGCCT GCCGGAATCG
GTAACGTTCC TGGTCAGCAA AGGTGCAGAG CGCAAGCGCA TTATGGCCAT TGTCCGCCGC
TTGGCACCTG AGCATGTCAA CGCCGACACC ACCTTTGTCA TGCCCGGCAA CGCCCCGGCT
GCAGGTGGAG CCATCGGCAC CATCCTCTCA CCGCGCTATC GCTTTGGTAC CTGCATGCTC
TGGGCGGGCT ATGTGTTGGC GCTGTTCCTG GTCTATCTGT TCAGCGGCTG GCTGCCGACG
CTGGTGAAGG AGGGCGGTGG TTTTTCGGTC TCGGAAGCGG CCATTGTCAC GGCCTGTTTC
CAGATAGGCG GCCCGGTGGG GGCGATTTCA GTGGGTTGGG CCATGGACCG TTGCAATCCG
CAGCGGGTGT TGATGCTGAC GTTTCTGTTC AGTGGCGCGG TTATCTTCAC GATTGGCCAA
GTGGTGGGGG ATTTCGCCTG GCTGTGCGCC ATAGCCTGCG CTGTGGGCTT TGGGCTGAAC
GGCGCGAGTG TTGGCATGAA TGCATTGGCG GCGGCCTTTT ACCCTACGCA AGCGCGGGCG
ACCGGGGCCA GCTGGATGAG CGGCATTGGG CGCATCGGCG CCGTGCTCAG CGCCTTCGCC
GGGGCTCAGA TGCTGGCGTT GGGCTGGAGT TTTGCACAAG TGTTTGCATC ATTACTGGTC
CCTGCCGGGT TGGCGGCTTT GGCCGTATTG CTGCAAGGGT GGCATGTGAG CAGGGCTTCA
CCTGTCACAA ATGCGACGTA TTACCAATAG
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| Protein sequence | MNNTLDVRQL IDQQPIGRYQ KWVVFLGFLI IALDGLDVAI IGFIAPQLKS DWHLGAQSLG
PVLSAALIGL ALGALIAGPL ADRYGRKAVL LYSVLLFGIW TLASAFSPNL ETLVALRFLT
GLGLGAAMPN ASTLVSEYAP ARSRSLLITL AFCGFSLGAA MGGFVSAWMI PNLGWRSVLV
LGGVLPLLVL PLLYWRLPES VTFLVSKGAE RKRIMAIVRR LAPEHVNADT TFVMPGNAPA
AGGAIGTILS PRYRFGTCML WAGYVLALFL VYLFSGWLPT LVKEGGGFSV SEAAIVTACF
QIGGPVGAIS VGWAMDRCNP QRVLMLTFLF SGAVIFTIGQ VVGDFAWLCA IACAVGFGLN
GASVGMNALA AAFYPTQARA TGASWMSGIG RIGAVLSAFA GAQMLALGWS FAQVFASLLV
PAGLAALAVL LQGWHVSRAS PVTNATYYQ
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