Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2740 |
Symbol | |
ID | 5870528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3073555 |
End bp | 3074175 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641547861 |
Product | hypothetical protein |
Protein accession | YP_001668973 |
Protein GI | 167033742 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.527612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGG TGGTCGACCT CGACAGGCTG CTCGACCAGC GCCGTATCTG GCGCGGTCGG CAGGCCGAGG CGCGGCCACT CGGGTTGCAG CCAACCGGCC ATGCGGCCCT CGACGCACGC TTGCCCGAAG GCGGCTGGCC GGCGGCAGCA CTGAGCGAGC TGTTGCTGGC CAGCCCCGGC TGTGGCGAGT TGCACTTGCT GTGGCCAACC CTGGCCCGGC TGAGTGCAGA TGCCAACCGC GTAGTGCTGG TGGCACCGCC CTTCATTCCT TACGCACCGG CCTGGCAGGC AGCAGGTGTG GACCTGCGCT GGCTGGTACA AGTGGACGCC GAACCTGCCG ATGCCCTGTG GGCCGCCGAG CAGTGCCTGC GCTCGGGCAG TTGTGCGGCG GTGCTGTGCT GGCCGGAGCG CGCCGATGAC CGCGCCCTGC GGCGCTTGCA GGTGGCCGCC GAAACCGGTC AGGCGTTGGC ATTCGCCTGC AGGCCGCAGC AGGCGGCGCA CAACCCTTCA CCGGCAGCAC TGCGCATTGC CGTCGACACT CGGCCGGCAC AATGGCGCGT GCTGAAAAGC CGTGGTGGCA TGCCTCCAGC GCTGCCCATT GCCTGCCCAG GGCGGGGCTG A
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Protein sequence | MGAVVDLDRL LDQRRIWRGR QAEARPLGLQ PTGHAALDAR LPEGGWPAAA LSELLLASPG CGELHLLWPT LARLSADANR VVLVAPPFIP YAPAWQAAGV DLRWLVQVDA EPADALWAAE QCLRSGSCAA VLCWPERADD RALRRLQVAA ETGQALAFAC RPQQAAHNPS PAALRIAVDT RPAQWRVLKS RGGMPPALPI ACPGRG
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