Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2710 |
Symbol | |
ID | 5870498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3038040 |
End bp | 3038717 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547831 |
Product | hypothetical protein |
Protein accession | YP_001668943 |
Protein GI | 167033712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.411001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC TGCCTCGCAT TACCCTGTTG TGCGCCGCCC TGCTTGCGGT GGCCGCTTGC TCCAGCAATC GCGTGGACCC CAAGGATTAC TCCGGCTTCC TCAAGGATTA CAGCCGGCTG CAGGAGGCCA AGAGCCCGTC GGGTGACCCG GTAATGCGCT GGATCGACCC CAAGGTCAAC GTCAACCAGT ACAGCCAGGT GTTCATCGAG CCCAGCCAGT TCTACCCCAA GCCGCAGCCG ACAGCGGTGA TCTCGCAGCA GACCTTGCAG GAGATCACCC GCTACTTCAA TGAAGCTCTG CGCCGTGAAA TGGGTAGCGT AGTGCCCTTG GCCAAGGGGC CAGGCCCCGG GGTGATCGTG GTGCGCCCTG CAATCACCGC GGTGTCTACC AGCAACGAGG GACTCAAGCC GTACGAGGTG ATCCCTATCG CGCTGATTTC GGCGGGGGTG AACACCGCCA TGGGTGGCCG TGATCAGGAG GTGGATGTCG GCGTGGAAGC AGCATTCCTC GATGGTGCCA GCCAGAAGGT ACTGGCCCAG GTGGTACGCA AAGGTACCGG CCAGGAGCTG GAAAACGATA CCCAGAAGCT GACCTTGAAT GATGTCAAGC CAGTGCTCGA TGGCTGGGCC AAGGACATGC GTGCGAGCTT CCTGGCGGCG AAGCAGAAAG CTCGCTGA
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Protein sequence | MKSLPRITLL CAALLAVAAC SSNRVDPKDY SGFLKDYSRL QEAKSPSGDP VMRWIDPKVN VNQYSQVFIE PSQFYPKPQP TAVISQQTLQ EITRYFNEAL RREMGSVVPL AKGPGPGVIV VRPAITAVST SNEGLKPYEV IPIALISAGV NTAMGGRDQE VDVGVEAAFL DGASQKVLAQ VVRKGTGQEL ENDTQKLTLN DVKPVLDGWA KDMRASFLAA KQKAR
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