Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2705 |
Symbol | |
ID | 5870493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3030996 |
End bp | 3032906 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547826 |
Product | hypothetical protein |
Protein accession | YP_001668938 |
Protein GI | 167033707 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.309228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.516166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTACC TGCCTTTGCC CAGCGACCAG GCCGACCGCC TCGCCAACGC GCCTGACAGC GACTTCTTCA CTACTGCCAG CATGCTTGAT GCCGCTGCGG TACTGTTTAT CCAAAATCTG CCACGCCAGC CCGCCACCGC CTCGGCCGAC GCGCAGGAGC GCCGTTTTGC CGAAATCGTG CGCATCGCCA ACGAAGTCGA AGGCGTCGCG CCTGGGCGAT TCCAAGGTCA GGTGGCGCAG CATTTCGATC ATGAGGCGTT CGCCATGGGC CTGGGTATGC TCGGCGAAAA TGGCATTGCG CTGCTGTCGG CCGAAGTGGC GTATCAGGCA GTCGAGCTGC TCGATGGCGA GGGCCAGTGG AACTTCCAGT TCGCCGACAG CTACCGCCAG CGTGCCACCC CGCTGCATCC GGTGCACCTG CCGTCGTTGG CCAACGACCT GATGCTCAGC GACCAGCAGA ACCGTCTGCT GCGTGAGTTC CTAAGTGGCG TCGACGAATC GGTGGCCGTG CAAGGCTTCG CCGGCACCGG CAAGACCTTT CTGATTCACC AGTTCGCCCG CCTGCTGGAG CCACAGCGCA CGTTGCTGCT GGCACTGACC GAAGGCCAGT TGCGCGCCCT GCAGGCGCGG GTCAAGGACG CTTCGGCGTA CACCGCGCTG ACCTTCGGCC AGCTGGCCGA CGAGCTGCTC AACCGCGACC TCACCAGCAA CGGCTGGCGC CTGCGTGACC CTTATCGCAC CAAACTGTCA TGGCGCCCGC AGGACGCGCA GGTGGTGCGC TGGCTGGCCA TCCCCGACAT AGGGCCGCTC GCTGCGCGTG ATGTGGTCGC CTTGTGCATC CGCGCCGTGC GCACGTTCTG CCACAGTGCC GATACCCAGT TGCAGTTGCA CCATTTGCCC TGGGCCGGGC CGGGCACCTC GCCGCTGGAT CAAGAGGTGC TGCTGGAAAA GGCCCGTTTG TACTGGCAGG AGCTGATTCG TCCGTCGGCG CGGGACATCC AGCTGCCGGT GCGTGACTAT CACCGGGTGA AACTGTTGTC GCTGACGGAT CATGTGATTG ACAGCCGCTA CACCCACGTC ATCGTCGATG AGGCCCATGA GCTGTCTGCA CCGATGCTTG CCGTGCTCGA TCGCAGCCCG CAGTCGATCA TTGCCCTGGG TGACGAACTG CAGAACCTCA ACGGCCTCAG CCCGCATCAT GGCAGCTTCA TCCGCCAGCG CTGCATCGAC CATTCGCTGC GCGCCGGGCC GGCAATGGAC AACGTGCTCA ACCCGCTGAT CCAGGCGCAC CCTGCCGCGA TTCAGGCGGC CTTCAGTGGC AGCGCCGAGC ATTACACCCG GGTCAGTTTC TTCGATACGG TGACAGTACC GCAGCAGCCC ACGGCGCTGA TCGTCGACGA CGAATGGGGC CTGTTTGGCT GGTTCCAGCG CCTGACGCAT CAGGGCGTGC CGTTCATCTT GCTGAAAAGC GCACGTAAGG ACTTCGAACT GTTCGTCGAG GACTGTATCG AGCTGTACCG CTACGGCACT CGGGCGCGCC ATCCAATGCT GTTCCGTTAT CCCAGCTGGC AGGCGTTGGA GCAGGAAAAG GGTGACGACA AAGCGTTTCT CGCGGTGGCC AGCATGCTGC GCAAGGGCTA TACACCGGAG CACTTCGCCA AGGCCAAGAG CCGTTACCGC TGGGACAAGG CGCCGAAATT GTTCCTGGGC CGGGTGCGGG ATGTGAAGAA CATGGAGTTT GCCCGGGTGA TGGTGTCGCC AGAGCTGATG GTCGCGCCCC AGGTGGCCGG GAACCGCAAT GAGCGGGCGC GGATGCTGGC GGGTTTGTAT ACCGCCTGTT CACGGGCGCG GCATGAATTG ATCGTGCCGG GAGGGATGCT GGACTGGGTC AAGGACCAGG TTCGGGATTG A
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Protein sequence | MFYLPLPSDQ ADRLANAPDS DFFTTASMLD AAAVLFIQNL PRQPATASAD AQERRFAEIV RIANEVEGVA PGRFQGQVAQ HFDHEAFAMG LGMLGENGIA LLSAEVAYQA VELLDGEGQW NFQFADSYRQ RATPLHPVHL PSLANDLMLS DQQNRLLREF LSGVDESVAV QGFAGTGKTF LIHQFARLLE PQRTLLLALT EGQLRALQAR VKDASAYTAL TFGQLADELL NRDLTSNGWR LRDPYRTKLS WRPQDAQVVR WLAIPDIGPL AARDVVALCI RAVRTFCHSA DTQLQLHHLP WAGPGTSPLD QEVLLEKARL YWQELIRPSA RDIQLPVRDY HRVKLLSLTD HVIDSRYTHV IVDEAHELSA PMLAVLDRSP QSIIALGDEL QNLNGLSPHH GSFIRQRCID HSLRAGPAMD NVLNPLIQAH PAAIQAAFSG SAEHYTRVSF FDTVTVPQQP TALIVDDEWG LFGWFQRLTH QGVPFILLKS ARKDFELFVE DCIELYRYGT RARHPMLFRY PSWQALEQEK GDDKAFLAVA SMLRKGYTPE HFAKAKSRYR WDKAPKLFLG RVRDVKNMEF ARVMVSPELM VAPQVAGNRN ERARMLAGLY TACSRARHEL IVPGGMLDWV KDQVRD
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