| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2659 |
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| Symbol | |
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| ID | 5870447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2976534 |
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| End bp | 2978141 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547780 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001668892 |
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| Protein GI | 167033661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.696058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAC CTTTGGCTTC ATTGAGCCTG GCCATTGCCC TGGCCCTGGC CGGTTGCGAC
GACAAACCGG CGCAACCGGC CAGCAGCGCT GAGGCAGCCA CCCCGCAGCA AGGCGGCGTG
CTACGGGTAG CCTTTGACGG CGACCCCAAC TGCATCGACC CGCAGCAGGC GGGCAACAAC
ACTGCCCTCA ACGTCGGCCG GCAACTGGTC GACTCGCTTA CCGATCAAGA CCCGCAAAGT
GCTGCAATCG TGCCGTGGCT GGCCGAGCGC TGGGAGGTCA GTGACGACTC GCGCCAGTTC
ACTTTCCACC TGCGCGAAGG CGCCACCTTC GCAGACGGCA GCCCGCTGGA TGCGGCGGCG
GTGAAGGCTA ATTTCGAGGC TATCGTCGCC TTGGGTGCCC AGGCGCAGCT GGCCAGTACC
TACCTGGCCG GCCTGGATAC CATTGAAGTG CTCGGGCCGC TTAGCGTGCG CATTGGTTTC
CACCAACCCA ACGCACAATT CCTCCAGGCC AGCTCTACCA TGAGCCTGGG GTTGCTAGCC
CCGGCCACCC TCAAGCGCTC CGCCGAGGAA CGCTGCCAAG GTGCGCTGGT AGGCAGCGGG
CCGTTCAATG TCAAGCGTTT CGAACATAAC CGCCTGGTGC GTATCGAGGC CCGCCACGAC
TATGCCTGGC CATCGTCGTT GGCCGGGCAC CCGGGCCGCG CCTGGCTCGA CGCCATCGAG
TTCCACATCC TGCCGGAATC CGGCGTGCGC CTGGGCAGCC TGTTGTCCGC GCAGATCGAC
GTCAACACAA GCGTGCCAGT GCAGGACGAG GCCGTGCTGC AAGCTCAGGG CGTGCCGTCG
ATCGCCCGTT CCAACCCTGG CATTGTCTTC AACCTGACAC CCAACGAGTC GCACCCGCCG
CTGGACGACG CCAATGTGCG CCGGGCACTG AACAAGGCCA TCGACCGCAG CCAGTTGCAG
GCGGTGATCT CGCGCTACCA GAAACCGGCC AGCTCGGTAC TGGCCAGCAG CACGCCGTAT
TACCAAGACC TCAGTGCCAG CCTCGCCTTC GATCCCGAAG GTGCCGCCAA GCTGTTGGAT
GCTGCGGGCT GGGCCAAAGG TGCCGATGGC TGGCGCCAGC GCGATGGCCA GCGCCTGAGC
TTCGCCCTCG ACTACTGGCA GGCCACCACC CCGGTGCTGG AACTGGTGCA GCAGCAACTG
CGCCAGGCTG GCGTGGAGCT GCGCCTGAAC AAGTCCACCA TTGGCCAGGT GAGCCTGCTG
CAGAGTTCGC AAAACTACCA GCTGTGGTTC TTCAACCTGA CCCGCGCCGA CCCGGACGTA
TTGCGCACCG TGTTCCTTGC CGCAGGTCGC AACGTCAACG TGCGTGGCGC GCTGCCACTG
GACCAGGCCC TGCTCGATTC GGCAGCCAGC CTGGATGCGC ACAAACGTGG CGAGCTGATC
GCTCAAGCCA GCCAGGCGTT ACTGGAGCAA GGCCATGTCA TTCCGCTGGT GGAGGCTGCA
ACGGTCACAG CGTTTCGCCA TGCCGTGCGC GGCCTGCACT ACGAAGCCTC GACCCGCCTG
CAGTTTTATG ACACCTGGCT GGCACAACCA GAGGCCACCA AACCATGA
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| Protein sequence | MFRPLASLSL AIALALAGCD DKPAQPASSA EAATPQQGGV LRVAFDGDPN CIDPQQAGNN
TALNVGRQLV DSLTDQDPQS AAIVPWLAER WEVSDDSRQF TFHLREGATF ADGSPLDAAA
VKANFEAIVA LGAQAQLAST YLAGLDTIEV LGPLSVRIGF HQPNAQFLQA SSTMSLGLLA
PATLKRSAEE RCQGALVGSG PFNVKRFEHN RLVRIEARHD YAWPSSLAGH PGRAWLDAIE
FHILPESGVR LGSLLSAQID VNTSVPVQDE AVLQAQGVPS IARSNPGIVF NLTPNESHPP
LDDANVRRAL NKAIDRSQLQ AVISRYQKPA SSVLASSTPY YQDLSASLAF DPEGAAKLLD
AAGWAKGADG WRQRDGQRLS FALDYWQATT PVLELVQQQL RQAGVELRLN KSTIGQVSLL
QSSQNYQLWF FNLTRADPDV LRTVFLAAGR NVNVRGALPL DQALLDSAAS LDAHKRGELI
AQASQALLEQ GHVIPLVEAA TVTAFRHAVR GLHYEASTRL QFYDTWLAQP EATKP
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