Gene PputGB1_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2655 
Symbol 
ID5870443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2970741 
End bp2971565 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID641547776 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001668888 
Protein GI167033657 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAG TAACCCCGCG CCACAGCATC ACCAACCTGC CAAACCATAA CCATCGCTTG 
CAGCTAAGTG CCCCGCCTAC CTTCAGCGAC CTGTCTGCCG AACGCCTGCA CCGCAAGCAA
CGCCTGGCCG CCTCGTACAG GTTGTTTGCC GAGCTGGGCT TCGAAGTGGG CCTGGCGGGC
CATTTCACCG CCCGCGACCC GATCGAGACT GACCACTACT GGATCAACCC GCTGGGCGTG
CCGTTTACGC AAATCCGTAC CTCAGACTTG CTACGCGTGG ATGGCCAAGG CCAGGTCGTC
GAAGGCAACG GCCTGCTCAA CACCAGCGCG CTCGAGCTGC ATTACCAATT GCAGCAGGCA
CGCCCCGAAG TGATCGGTAT CGCCCACCTG CACAGCTTTC ATGGCCGGGT CTGGTCATCG
CTGGGCCAGC TGTTCCAGCC GATCACGGCC GAAGCCTCGG CCTTCCGTGG CGAGCAGGTG
TTGTTCGACC GCAACGCCCT GCGTGATGCC GGCGGTGGCC TGCTGCAAGA CCGCGACCTG
GTTGCCCGGG CCTTCGTCGA AGCCTTCGCC GGGCATAACC TGCTGGTCTG GCAGAACCAT
GGGCTGTGGG TCACCGGCCA GTCGGTCGAA AGTGCAGCCT GGCGTTTCAT CCTCGCCGAC
GACACCGCTC GCGCGCACTT GCTCGCTTAT GCTGCCGGGC AGCCGCGCGT ACCGGAACAG
CTCGAAGGGG CCAGCAACCC GGCCCAACGC GAACTGTTCG CCTGGTTGAA CTTTGTGCCG
CTGTGGGACC GTATCGTCCA GCAGCAGCCC GACCTCCTGG ACTGA
 
Protein sequence
MSQVTPRHSI TNLPNHNHRL QLSAPPTFSD LSAERLHRKQ RLAASYRLFA ELGFEVGLAG 
HFTARDPIET DHYWINPLGV PFTQIRTSDL LRVDGQGQVV EGNGLLNTSA LELHYQLQQA
RPEVIGIAHL HSFHGRVWSS LGQLFQPITA EASAFRGEQV LFDRNALRDA GGGLLQDRDL
VARAFVEAFA GHNLLVWQNH GLWVTGQSVE SAAWRFILAD DTARAHLLAY AAGQPRVPEQ
LEGASNPAQR ELFAWLNFVP LWDRIVQQQP DLLD