Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2655 |
Symbol | |
ID | 5870443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2970741 |
End bp | 2971565 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547776 |
Product | class II aldolase/adducin family protein |
Protein accession | YP_001668888 |
Protein GI | 167033657 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG TAACCCCGCG CCACAGCATC ACCAACCTGC CAAACCATAA CCATCGCTTG CAGCTAAGTG CCCCGCCTAC CTTCAGCGAC CTGTCTGCCG AACGCCTGCA CCGCAAGCAA CGCCTGGCCG CCTCGTACAG GTTGTTTGCC GAGCTGGGCT TCGAAGTGGG CCTGGCGGGC CATTTCACCG CCCGCGACCC GATCGAGACT GACCACTACT GGATCAACCC GCTGGGCGTG CCGTTTACGC AAATCCGTAC CTCAGACTTG CTACGCGTGG ATGGCCAAGG CCAGGTCGTC GAAGGCAACG GCCTGCTCAA CACCAGCGCG CTCGAGCTGC ATTACCAATT GCAGCAGGCA CGCCCCGAAG TGATCGGTAT CGCCCACCTG CACAGCTTTC ATGGCCGGGT CTGGTCATCG CTGGGCCAGC TGTTCCAGCC GATCACGGCC GAAGCCTCGG CCTTCCGTGG CGAGCAGGTG TTGTTCGACC GCAACGCCCT GCGTGATGCC GGCGGTGGCC TGCTGCAAGA CCGCGACCTG GTTGCCCGGG CCTTCGTCGA AGCCTTCGCC GGGCATAACC TGCTGGTCTG GCAGAACCAT GGGCTGTGGG TCACCGGCCA GTCGGTCGAA AGTGCAGCCT GGCGTTTCAT CCTCGCCGAC GACACCGCTC GCGCGCACTT GCTCGCTTAT GCTGCCGGGC AGCCGCGCGT ACCGGAACAG CTCGAAGGGG CCAGCAACCC GGCCCAACGC GAACTGTTCG CCTGGTTGAA CTTTGTGCCG CTGTGGGACC GTATCGTCCA GCAGCAGCCC GACCTCCTGG ACTGA
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Protein sequence | MSQVTPRHSI TNLPNHNHRL QLSAPPTFSD LSAERLHRKQ RLAASYRLFA ELGFEVGLAG HFTARDPIET DHYWINPLGV PFTQIRTSDL LRVDGQGQVV EGNGLLNTSA LELHYQLQQA RPEVIGIAHL HSFHGRVWSS LGQLFQPITA EASAFRGEQV LFDRNALRDA GGGLLQDRDL VARAFVEAFA GHNLLVWQNH GLWVTGQSVE SAAWRFILAD DTARAHLLAY AAGQPRVPEQ LEGASNPAQR ELFAWLNFVP LWDRIVQQQP DLLD
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