| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2649 |
|---|
| Symbol | |
|---|
| ID | 5870438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2964809 |
|---|
| End bp | 2965318 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641547772 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001668884 |
|---|
| Protein GI | 167033653 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.588038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATCC GCCCTACCTT TGAGCGCGAC ATTCAATGGC TGCCAGGCGT CGAGCGATCG
GCAGCCCAGG CTTTTGTCGG CTGGCCGGCA CTGGCCTGGC TGGCGCAAGG TGATGTGATG
GACTGCGCTG CACACAGGGC TTTTGTCGAG GAAGGTGGTA GTTGGGTCGC TGAGGATCCG
GCTGGGCGCA TTGTCGGTTT TGCCTGCGCC AGGCTTGCGG ACCAAGCGCT GCACCTTCAT
GAAATATCAG TGTGCCGGGA GGGCCAAGGG CAAGGTGTCG GGCGCCGCTT GCTGCGGCAA
GTGGTCGATG CCGCACGCTG CGCCGGTGTG CGCGAGCTGA CCTTGACCAC CTTTGTCGAT
GTGCCCTGGA ATGCGCCGTT TTATGCCCGT TTTGGGTTTG AGCGGCTGCA TGAAAGGCTG
CTGAACGATC GACTCCGGGG CATTCTGGCC AGTGAGCACA CTCACGGTCT CGAAGGGCGT
TGTGCAATGC GCCTCTGCGT CGGCCATTAA
|
|---|
| Protein sequence | MLIRPTFERD IQWLPGVERS AAQAFVGWPA LAWLAQGDVM DCAAHRAFVE EGGSWVAEDP
AGRIVGFACA RLADQALHLH EISVCREGQG QGVGRRLLRQ VVDAARCAGV RELTLTTFVD
VPWNAPFYAR FGFERLHERL LNDRLRGILA SEHTHGLEGR CAMRLCVGH
|
|---|
| |