Gene PputGB1_2639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2639 
Symbol 
ID5870428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2956310 
End bp2957008 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID641547762 
Productglycosyl transferase family protein 
Protein accessionYP_001668874 
Protein GI167033643 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.613658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCG TGGTCATCCC TGCGCATAAC GAAGCGCGCC GGCTGGGACG CTGCCTGCGG 
GCGGTGCTGG TCGCTGCCCA GCAGGCGCAG CAGGCGGGGT ACCGCGTGGA GGTGCTGGTG
GTACTCGACC GCTGCAGTGA CGCAAGCGCC GCGGTGGCAA GGCGTTTCGG TGTCCAGGCC
TTGATGGTGG ATGCCGGGAA TGTCGGCATG GCGCGCCGGG TGGGTGCGGC GCACATGCTC
GAACGCGGCG CGCAGTGGTT GGCCTGCACC GATGCAGATA GCCGGGTACC GGCACACTGG
CTGATGTCGC AGCTGGCCTG CAGCGCCGAC GTGGTGTGCG GCACGGTGCA CATCGACTAC
TGGCAACCCT GGCACACAGC CGCCCTGCGC AAGGTGTACC AGAGCCGCTA TGAAGCGCGC
GAAGGCCACC GGCATGTGCA CGGCGCGAAT CTGGGGGTAT GTTCCGATGC CTACGCGCGG
GTGGGCGGCT TCAAACCGTT GGCGGCGCAT GAAGATGTGC AACTGGTCAA TGACCTTCAG
GCCTGCGGCG CACAGATCGT CTGGACCGCC AGGCACAGCG TGGCCACCAG CAGCCGGCTT
GACAGCCGCG CCCGCGAAGG GTTTGGTGAT TATCTGGCGA GGTTGCAGGC ACAGGCCTCG
CAAAGCGCCC CCGACAGCCC TCCGGTTAAA ACCTCATGA
 
Protein sequence
MIAVVIPAHN EARRLGRCLR AVLVAAQQAQ QAGYRVEVLV VLDRCSDASA AVARRFGVQA 
LMVDAGNVGM ARRVGAAHML ERGAQWLACT DADSRVPAHW LMSQLACSAD VVCGTVHIDY
WQPWHTAALR KVYQSRYEAR EGHRHVHGAN LGVCSDAYAR VGGFKPLAAH EDVQLVNDLQ
ACGAQIVWTA RHSVATSSRL DSRAREGFGD YLARLQAQAS QSAPDSPPVK TS