| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2592 |
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| Symbol | |
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| ID | 5870381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2912531 |
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| End bp | 2913637 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547715 |
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| Product | peptidase S58 DmpA |
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| Protein accession | YP_001668827 |
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| Protein GI | 167033596 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.119043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAG CACGCGACTT CGGTATCACG CTGGGCCTTG GTCAACCAGG CCCGTACAAC
GCAATCACCG ATGTACCGGG TGTACGGGTT GGCCATGCCA CCCTGAACAC GACCCATGAC
GGAAAACCTG TGCGTACCGG TGTTAGTGTC ATCGAGCCCC GTGAGGGCCC GGCGCGCCAT
CAGCCTTGTT TTGCCGGCTG CCATGTATTG AACGGCAATG GCGACGCCAC AGGCCTGGAG
TGGATTCGTG AAGCGGGCCT GTTGACGACC GCCATTGCCA CCACCAACAC GCACAGCGTT
GGGGTGGTGC GCGACGCGCT GATCGCCCAC GAGCATGCGA CCCTGGCGGA CGCATCGACC
TACTGGTGCA TGCCGGTGGT GATGGAGACC TACGACGGCG TGTTGAACGA CATCTGGGGC
CAGCATGTCA ACGCGGACCT GGTTCAGCAA GCGCTGGGGG CAGCATGCAG CGGGCCGGTG
GCCGAGGGTG GCGTAGGCGG CGGCACCGGG ATGATCTGCC ATGAGTTCAA AGGCGGGATT
GGTACGGCGT CACGGGTGTT GCTGGCAGAG CAGGGTGGCT GGACGGTGGG CGCCTTCGTT
CAGGCCAATC ATGGCCAGCG TCGGGAGCTG CGGGTGGATG GCTATCCCGT GGGCCGGGTG
TTGCTTGGCC TCCCTTCGCC ATTTGACCAG CAGGACACCC CTGGCATGGG CTCGATCGTG
GTGGTATTGG CCACCGATGC ACCGTTGCTG CCACATCAAT GTCAACGCCT GGCGCAACGT
GCTGCGCTGG GCATTGCCCG CACCGGGGGC GGCACCGATG ACTCCAGTGG CGACATCTTC
CTGGCCTTCT CGACGGGGAA CACCGGGCTG GCGCCTGCCG ATTACAACCG CCGCGATCTG
CCGGTGACCG CGCAAGTGGC GATGGTCAAC AACGACCATA TTTCGCCGCT GTTCGCCGCG
GCGGCCGAGG CCGTGGAGGA AGCCATTGTC AACGCGATCC TGGCAGGCAG GTCGATGCTG
GCAGGAGATG GACGAGAGGT GCCTGGCCTT GAGGGTGCAC GCTTGCTGAT GGCCCTCGAA
CAAGTGGGCT GGAAGGCTCA AGGTTGA
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| Protein sequence | MMRARDFGIT LGLGQPGPYN AITDVPGVRV GHATLNTTHD GKPVRTGVSV IEPREGPARH
QPCFAGCHVL NGNGDATGLE WIREAGLLTT AIATTNTHSV GVVRDALIAH EHATLADAST
YWCMPVVMET YDGVLNDIWG QHVNADLVQQ ALGAACSGPV AEGGVGGGTG MICHEFKGGI
GTASRVLLAE QGGWTVGAFV QANHGQRREL RVDGYPVGRV LLGLPSPFDQ QDTPGMGSIV
VVLATDAPLL PHQCQRLAQR AALGIARTGG GTDDSSGDIF LAFSTGNTGL APADYNRRDL
PVTAQVAMVN NDHISPLFAA AAEAVEEAIV NAILAGRSML AGDGREVPGL EGARLLMALE
QVGWKAQG
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