Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2583 |
Symbol | |
ID | 5870372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2900778 |
End bp | 2901437 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547706 |
Product | putative hydrolase alpha/beta fold |
Protein accession | YP_001668818 |
Protein GI | 167033587 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.141218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.364663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACA CCCCGCGTAA CCCACTGCTC ATCGACGGGC CGCTCGGCCA GATCGAGCTG TTGATCGACT ACCCCGCTGG CGCACCGAAG GGGCTGGTGC TGGTCAGCCA CCCGCAACCG CTGCTGGGCG GCAGCCCACG GCATATCGTG CCGCTGACCT TGGCACGGCA GTTATGTGCA GCCGGCTGGC AAGTGGTGCG GCCGAGCTTT CGTGGGGTGG GACAGACGCA AGGGGTGCAT GACGAAGGCA TCGGCGAAGC GCAGGACTGC ATTGCGGTTA TTCGTCACTT CAGCCGGGAA CTGCCAGAGC TGCCGCTGGC CCTGGTCGGG TTTTCCTTTG GTGCCTACGT GTTCGCGCGT GTGGCTTGTG AGCTTGAAGG GCAGCTGCAG GCGGTGGCAT TGCTGGGGCT GCCGGTGGGT GATGTGCCGG GCGGGCGTTA TTACGAGCCA TTGCCGGTGC CTGCGGATTG CCTGTTGCTG CATGGCGAAC GGGATGAAAT GGCGCCGCTG GCCAACCTGC TGCAATGGGC AGGCCCTGGC CAACGGGCGG TGTCGGTGTA TGCCGGTGCC AACCACTTCT TCAAGGGCTG CCTGGGACGC GCAGTGGAGC AGGTGATCGA GCATCTGGCC CTGAAAACTG CCGGTTATCG CTCCAGGTAG
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Protein sequence | MSDTPRNPLL IDGPLGQIEL LIDYPAGAPK GLVLVSHPQP LLGGSPRHIV PLTLARQLCA AGWQVVRPSF RGVGQTQGVH DEGIGEAQDC IAVIRHFSRE LPELPLALVG FSFGAYVFAR VACELEGQLQ AVALLGLPVG DVPGGRYYEP LPVPADCLLL HGERDEMAPL ANLLQWAGPG QRAVSVYAGA NHFFKGCLGR AVEQVIEHLA LKTAGYRSR
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