Gene PputGB1_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2583 
Symbol 
ID5870372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2900778 
End bp2901437 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID641547706 
Productputative hydrolase alpha/beta fold 
Protein accessionYP_001668818 
Protein GI167033587 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.141218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.364663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACA CCCCGCGTAA CCCACTGCTC ATCGACGGGC CGCTCGGCCA GATCGAGCTG 
TTGATCGACT ACCCCGCTGG CGCACCGAAG GGGCTGGTGC TGGTCAGCCA CCCGCAACCG
CTGCTGGGCG GCAGCCCACG GCATATCGTG CCGCTGACCT TGGCACGGCA GTTATGTGCA
GCCGGCTGGC AAGTGGTGCG GCCGAGCTTT CGTGGGGTGG GACAGACGCA AGGGGTGCAT
GACGAAGGCA TCGGCGAAGC GCAGGACTGC ATTGCGGTTA TTCGTCACTT CAGCCGGGAA
CTGCCAGAGC TGCCGCTGGC CCTGGTCGGG TTTTCCTTTG GTGCCTACGT GTTCGCGCGT
GTGGCTTGTG AGCTTGAAGG GCAGCTGCAG GCGGTGGCAT TGCTGGGGCT GCCGGTGGGT
GATGTGCCGG GCGGGCGTTA TTACGAGCCA TTGCCGGTGC CTGCGGATTG CCTGTTGCTG
CATGGCGAAC GGGATGAAAT GGCGCCGCTG GCCAACCTGC TGCAATGGGC AGGCCCTGGC
CAACGGGCGG TGTCGGTGTA TGCCGGTGCC AACCACTTCT TCAAGGGCTG CCTGGGACGC
GCAGTGGAGC AGGTGATCGA GCATCTGGCC CTGAAAACTG CCGGTTATCG CTCCAGGTAG
 
Protein sequence
MSDTPRNPLL IDGPLGQIEL LIDYPAGAPK GLVLVSHPQP LLGGSPRHIV PLTLARQLCA 
AGWQVVRPSF RGVGQTQGVH DEGIGEAQDC IAVIRHFSRE LPELPLALVG FSFGAYVFAR
VACELEGQLQ AVALLGLPVG DVPGGRYYEP LPVPADCLLL HGERDEMAPL ANLLQWAGPG
QRAVSVYAGA NHFFKGCLGR AVEQVIEHLA LKTAGYRSR