| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2580 |
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| Symbol | |
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| ID | 5870369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2897882 |
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| End bp | 2898721 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547703 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001668815 |
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| Protein GI | 167033584 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.862888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.479184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAG TCGCACGCTT GTTCGCACTC ACCGCCGTTG CCGGCAGCCT GACCCTGATG
GCCGGCGCCG CCTGGGCCGG TGCCACCCTT GACCGCATCC ACCAGAGCAA GGTCATGAAC
GTGGCCACCG CCGCCAACTG GCCACCGCAG TCGTTCCTTG GCGAGGACAA TACCCTCAAG
GGCTTCGACA TCGATGTAGC CAACGAGATC GGCAAACGCC TGGGCACCCA AGTGGCCTTC
GTCACCCCCG AGTACGGCAT CATCACGGCA GGGCGCTGGG CCAGCCGCTG GGACCTGTCG
GTCGGTTCGA TGACCCCCAC CACCGAGCGT GGCCGGGTGC TCGACTTCCC GGCCATCTAC
TACTACACCC CCTACGTCTT CGCCGTGCAC AAGGACGCCG CCGGGAGCAA CACTGCCGAC
CTTAACGGCA AGACCATCGG CGTCGAGGCC GGTACCACTT CCGAGGACTA CATCAACCGC
CGGCTGAAAA TCGACGCAGC GGATGTGCCA GCCTTCAGCT ACAGCGTAGA GCCAGGCGAA
GTGCAGACCT ATGGCGACAG CATGGGCCCG CTGGACGACC TGCGCATGGG CAACGGCACC
CGCCTGGATG CCACCTTGTC GGCACTGCCA ACCGTCATGG GTGCGATCAA GGCTGGATAC
CCGATCACCC CTGTGCAGGG CAAGCCCGCC TACTACGAGC CACTGGCCAT CGCCACCGAC
AAGGGCGACG ACGCCTTCAA CGCCGAACTG GCCAAGGCGG TCGAGGGCAT GAAGGCCGAC
GGTACGCTGA AACAGCTGTC CGAGAAGTGG TACGGCGCCG ACCTCACGCA AGTGCAGTAA
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| Protein sequence | MNPVARLFAL TAVAGSLTLM AGAAWAGATL DRIHQSKVMN VATAANWPPQ SFLGEDNTLK
GFDIDVANEI GKRLGTQVAF VTPEYGIITA GRWASRWDLS VGSMTPTTER GRVLDFPAIY
YYTPYVFAVH KDAAGSNTAD LNGKTIGVEA GTTSEDYINR RLKIDAADVP AFSYSVEPGE
VQTYGDSMGP LDDLRMGNGT RLDATLSALP TVMGAIKAGY PITPVQGKPA YYEPLAIATD
KGDDAFNAEL AKAVEGMKAD GTLKQLSEKW YGADLTQVQ
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