Gene PputGB1_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2574 
Symbol 
ID5870363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2891528 
End bp2891995 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content59% 
IMG OID641547697 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001668809 
Protein GI167033578 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.132421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.192391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCG ATCACTTCGA TCTGGCCCTG CTCGAGGCCG TACAGCGCAA TGCCGGGACG 
TCGCAGTTGG ACCTGGGCAC GCAGGTCAAC CTGTCCTCGG CAGCGGTGAA CCGGCGCTTG
AAGAAAATGG CGGCCGACGG CGTGATCCGT GGAACGGTGG CACAGGTGGA TGCCGTGCAT
CTGGGTTACA CGCTGACCGT AATCACCGAG GTCGAAGTGG AGAACGAGCG GCTGGACCTG
CTGGACGAGA TGAAGCGCAC CTTCCTCGCC TGCCCGCAGG TGCAACAGTG CTACTACGTG
GCGGGGGAAT GCGATTTCGT GCTGATCATG CTGGTGCGGC ACATGGAGCA GTACACCCAG
CTGACCCGTG AGTTGTTCTT CGAAAACAAC AATGTCAAAC GCTTCAAGAC GTTGGTTTCG
ATGAGCAATG TGAAGACCGG CATGTTCGTA CCGACGCTCA CGGCTTGA
 
Protein sequence
MPLDHFDLAL LEAVQRNAGT SQLDLGTQVN LSSAAVNRRL KKMAADGVIR GTVAQVDAVH 
LGYTLTVITE VEVENERLDL LDEMKRTFLA CPQVQQCYYV AGECDFVLIM LVRHMEQYTQ
LTRELFFENN NVKRFKTLVS MSNVKTGMFV PTLTA