Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2573 |
Symbol | |
ID | 5870362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2890231 |
End bp | 2891496 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547696 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001668808 |
Protein GI | 167033577 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.236887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCC GGCGCCTGTT CTGGAAGCTG TTTCTGGCGT TCTGGCTGGC CAACTGCCTG ACCTTCCTGG TGGGGGCGGG CGCTTTCATG CTCAATGACT GGCGTGGCGA TACGCCGGCG CTGCGCTCGC TGCTGGCCAC CGAACTGCAG CTGTTGCAGG GTTACGGCGA GCAGGCAGGC CGACAGCTGC TTGAGGTATC ACCGCAACCG CCCGATGTAC AGGTGGGCCT TTACGACAGC CAAGGCCAGT TGCTGGCCGG CAGAGCGGTG CCGGTGGCGC GTTTCGAGCA GGCGTTGAGC GACCGTGAAG GTCGCCCGCT GGTGCTACGT GCTTCGGTGG CCACGGTGCT TGGCGAGCCA CCGCGCCCGC GTGGTATGGG CCCGTTGTTT ACCGGCACGC TGATGAGTGC ACTGTTCGCC TTCCTGTGCA GCTTGTACCT GACTCGCCCG CTGGCCTGGT TACGTGAGGC GATGGGCCAG GTAGCCCAGG GCCGCTTCGA AGTGCGGGTA AAGCCCAGGC TGGGCAAGCG CCGCGACGAG ATCGTCGAGC TGGCGGAGGA CTGCGACCGC ATGGCCGGTC AGCTGAAGGC ACTGGTGCAG GCGCAGCAGA ACCTGCTGCA CGATATTTCC CACGAACTGC GTTCACCGCT GACGCGCATG CATGCTGCCA TTGGCCTGAT GCGCCAGCAG CCCGACCGGC ACGACATGCT GGAGCGGGTG GAGCGCGAAT CGCGGCGCAT GGATGACCTG ATCGAGCAGT TGTTGACCTT GGCCCGCGCC CAGGCTCGCC AGGGCGATAG CGACTTTGCC AGCGTGGATG TGGTGGAGCT GCTGGCGCAG ATCGTCGAAG ACGCCCGCTT CGAGGCCGGC ATGAAGCAAT GCCAGGTGTC TTTGCAAGCC CAGGGTGCGT TTCTCATCCA CGGTCATGAA GAACTGCTGT ACCGGGGGTT CGAGAACATC ATCCGCAACG CGGTGCGCTA CACCGCAGTT GGTACGGAGG TGTTGGTGGA GGCCGCTATG GCGCCGGGTG GGCAATGGTT TCAGGTCTGT GTCAGCGACC ATGGGCCGGG CGTAGATCCG GCGCGCCTGC CGCGGATCTT CGAGCCGTTC GACCGGGGTG CCGACAGCGA TGGTGATGGT TTCGGCCTGG GCTTGGCTAT CGCCCAGCGG GCCATTGCCC TGCACGGCGG TAGTATCACT GCGCAGGCCG CCGCCACTGG TGGTCTGCGG GTGCGCATCG AACTGCCACA GGCAAGCCCG GCTTGA
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Protein sequence | MMRRRLFWKL FLAFWLANCL TFLVGAGAFM LNDWRGDTPA LRSLLATELQ LLQGYGEQAG RQLLEVSPQP PDVQVGLYDS QGQLLAGRAV PVARFEQALS DREGRPLVLR ASVATVLGEP PRPRGMGPLF TGTLMSALFA FLCSLYLTRP LAWLREAMGQ VAQGRFEVRV KPRLGKRRDE IVELAEDCDR MAGQLKALVQ AQQNLLHDIS HELRSPLTRM HAAIGLMRQQ PDRHDMLERV ERESRRMDDL IEQLLTLARA QARQGDSDFA SVDVVELLAQ IVEDARFEAG MKQCQVSLQA QGAFLIHGHE ELLYRGFENI IRNAVRYTAV GTEVLVEAAM APGGQWFQVC VSDHGPGVDP ARLPRIFEPF DRGADSDGDG FGLGLAIAQR AIALHGGSIT AQAAATGGLR VRIELPQASP A
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