| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2567 |
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| Symbol | |
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| ID | 5870356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2883146 |
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| End bp | 2884438 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547690 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668802 |
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| Protein GI | 167033571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.128703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.227607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCC CAAGCCTGGC ACCTCGCCGT TGGTGGTACA TCATCCCAAT CGTGTTCTTC
ACTTACAGCC TGGCGTACCT GGACCGCGCC AATTACGGTT TCGCCGCCGC CTCTGGCATG
GCCGACGACC TGCAAATCAC TCCCGTGCTG TCTTCGCTGC TGGGTGCGCT GTTCTTTCTC
GGTTACTTCT TCTTCCAGGT GCCCGGTGCC ATCTACGCCG AAAAGCGCAG CGTGAAGAAG
CTGATCTTCG TCTGCCTGAT CCTTTGGGGC GGCCTTGCCA CGCTTACCGG TATGGTCAGC
AACGTCTACA TGCTGATCGG AATCCGCTTC CTGCTTGGGG TGGTGGAGGC GGCGGTCATG
CCGGCAATGC TGGTGTACCT GTGCCATTGG TTCACCCGTG CCGAGCGCTC GCGTGCCAAT
ACCTTTCTGA TGCTCGGCAA CCCGGTGACC ATCTTGTGGA TGTCGGTGGT GTCGGGGTAC
CTGATCAAAC ATTACGACTG GCGCTGGATG TTCATCATCG AAGGCCTGCC AGCTGTGATT
TGGGCGTTCT TCTGGTGGCG CCTGGTGGAT GACCGCCCGG CCCAGGTCAG CTGGCTGAGC
GCACAGGAAA AGGCCGCCCT TGCGCAAGCA CTGGCCGCCG AGCAGCAGGG CATCAAGCCA
GTGAAAAACT ACCGCGAGGC GTTCCGCTCG CCGCAGGTGA TCATCCTGGC GCTGCAGTAC
TTCTGCTGGA GTATTGGCGT GTATGGCTTC GTGCTGTGGC TGCCGTCGAT TCTCAAGCAA
GCGGCGAACG TCGATATCGT GCAGGCCGGC TGGCTGGCCT CGGTGCCGTA CCTGGCAGCG
GTGCTGGCGA TGGTGGGCGT GTCCTGGGCG TCCGACCGCC TGCAAAAACG CAAGCGTTTC
GTCTGGCCGC CACTGCTGAT TGCCGCCGTG GCGTTCTATG GCTCGTACGC CTTGGGCACT
GAGCACTTCT GGCTGTCGTA TACGTTGCTG GTGGTCGCCG GTGCCTGCAT GTACGCACCC
TATGGCCCGT TCTTCGCGAT CGTGCCCGAG ATCCTGCCGG CCAACGTCGC AGGCGGTGCC
ATGGCCCTGA TCAACAGCAT GGGCGCGCTG GGCTCGTTCG GTGGCTCGTG GCTGGTGGGC
TACCTCAATG GCGCAACAGG CGGGCCTGGT GCCTCTTACC TGTTCATGTG CGGTGCGCTG
CTGAGCGCAG TGGCGCTTAC CGCTGCACTC AATACTTCCC AAATGTCTGG CCGGGCAAAG
CGCGATAGCG CGCAACTGGC CGTGAACCCT TAG
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| Protein sequence | MQSPSLAPRR WWYIIPIVFF TYSLAYLDRA NYGFAAASGM ADDLQITPVL SSLLGALFFL
GYFFFQVPGA IYAEKRSVKK LIFVCLILWG GLATLTGMVS NVYMLIGIRF LLGVVEAAVM
PAMLVYLCHW FTRAERSRAN TFLMLGNPVT ILWMSVVSGY LIKHYDWRWM FIIEGLPAVI
WAFFWWRLVD DRPAQVSWLS AQEKAALAQA LAAEQQGIKP VKNYREAFRS PQVIILALQY
FCWSIGVYGF VLWLPSILKQ AANVDIVQAG WLASVPYLAA VLAMVGVSWA SDRLQKRKRF
VWPPLLIAAV AFYGSYALGT EHFWLSYTLL VVAGACMYAP YGPFFAIVPE ILPANVAGGA
MALINSMGAL GSFGGSWLVG YLNGATGGPG ASYLFMCGAL LSAVALTAAL NTSQMSGRAK
RDSAQLAVNP
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