| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2549 |
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| Symbol | |
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| ID | 5870338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2859816 |
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| End bp | 2860475 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641547672 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_001668784 |
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| Protein GI | 167033553 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0145041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCC TCATGATCCA GTCCGACCTC GACCTGTTCG GCCCCCAGCC GCAACGCCTG
GCCAGCCACA CCGTGCTGCT GCCTGGCTTC GCCCTGGCCG AAACCGAGGC GCTGCTCGAC
GCCCTGCGCC CAGTGCTGCG TGCCGCGCCG TTCCGGCACA TGCACACCCC GGGGGGCCTG
CGCATGGCGG TAGGCCTGAC CAATTGCGGC TCGCTGGGCT GGGTGAGTGA CGAAGGCGGC
TACCGCTACA GCCCCAGCGA CCCACTCAGC GGCAAGCCCT GGCCCGCCCT GCCCCCGGTT
TTGCTCGCCC TGGCTGCCCG AGCTGCAGCC TTGGCTGGGT TCGAGGGTTT CGTGCCAGAT
GCCTGCCTGG TCAACCACTA CTTGCCGGGC ACCCGCCTGA GCCTGCACCA AGACCGCGAT
GAGCAGGATT TCGGCCAACC GATCGTGTCG GTGTCACTGG GCTTGCCGGC GGTGTTCCTG
TTCGGCGGTC TGCAGCGCGC CGACAAAACC CAGCGCATCC CGCTGAGCCA CGGCGATGTG
TTGGTTTGGG GGGGCATAGA CCGCTTGCGC TTCCATGGTG TGCTACCGAT CAAGCCCGGC
ACGCACCCGC GTCTGGGTGA GCGGCGTATC AACCTGACTT TGCGCAAGGC GGGTGCCTGA
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| Protein sequence | MQPLMIQSDL DLFGPQPQRL ASHTVLLPGF ALAETEALLD ALRPVLRAAP FRHMHTPGGL
RMAVGLTNCG SLGWVSDEGG YRYSPSDPLS GKPWPALPPV LLALAARAAA LAGFEGFVPD
ACLVNHYLPG TRLSLHQDRD EQDFGQPIVS VSLGLPAVFL FGGLQRADKT QRIPLSHGDV
LVWGGIDRLR FHGVLPIKPG THPRLGERRI NLTLRKAGA
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