| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2494 |
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| Symbol | |
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| ID | 5870283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2795388 |
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| End bp | 2799215 |
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| Gene Length | 3828 bp |
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| Protein Length | 1275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547617 |
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| Product | hypothetical protein |
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| Protein accession | YP_001668729 |
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| Protein GI | 167033498 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.258139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.329093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT ACCTTCCGCA TCAAGCCCTG CTGAAGGCGC AACTACCCCA TTGGGCCCAC
CGGGCAACAC CCAAACAGTG GGCCGCGTTG CAGCAAACCC AGGCTAATGC CTGGCAAGAG
CAGGACTGGT TCGCCAATGC CGCCCCAGAC CTGCGCCAGG CAGTGCACGC CAGCCAGGCA
CGCCTGGTTC GCTCACAAGC CGCCTTGGCC CGCTCACTCA AGGGCCTCGC ACAGATCACC
GAATTCGCCG AACCCTTGCT GCAAGGCCGC CTTGCGGCAC ATGGTTTTCA CGCGCCACTG
CGCAACAGCC AGTTGCTGCG GGTTGAAAGC AACTGGCACT GGGTCGGCTT ACGCTATCTC
TACAGCCATC GTCGCGACAA TTTGTTACAA GCGGCCCTGC AGAACTTTGC CGATGACGAA
GTATTTACCT CCCAGAGCGC GATTGCGCTG AAGGACAACA TCCATGTCAC GGCAATTCAG
GTTCAAGGGT ACGCTCCCCT TGGCATGCAG GTGCCGACTG CGCAGTTTCC ACTGAAGTCG
GAACACTACC AGGTAGATCG TTTGCCGCTT AGTCCCGAAG CCTTCGCCAC ACTGTGTCGA
GAACTGGACT TGGGTGGCAC CTACCAGGCC CATCTGACAC ACCATTTAGG GCAACCCGGC
GTTCGCGCGC AAGCCATGCA CGTGCAACAA GACAGCCTGC GGCTGGCGGC CGACCTGGCC
TACCTGCGAC ACCTGCTTGG CGGCAACGCT CGTGACGAAA TAGAGCGACT GTTGCAAGGT
GACAACGTGA CGTGCTGGCA GCTGGCGCTG TTCGGCAGCA TCCTGCACGA AGTGATGCTG
ATCGATGTCG GCAGCGCGGG GCTTGCGCTG TTCTTGCCTG GCCATGACCC AGCGCTGCGC
CAGTGCCATG ACCTTGAAGC GGTGCATGAA GCGTTGGCGA CGTTGTTGCT GGAGCCCGCA
GCGCGCCAGG CATTTACCGC CTACATCAGG CTGGATGAGC GCGCGCACTT TCTCGACCTG
CTGCAACAGA ACCTCGACGC CTCCGGCAAC GCTGCCTTCG ACCGCCCCTG GCTGCGTGCA
GCGCACGTGG ACTTGCGCCC GACGCACCAG GTGATCGCGG CAGAGCCGTT CGGCTACTAC
CAGGACCAGC ACCTGGCCCG CCTCAAGCAT GAAGCCAGCC AGCTTGCGGT ACCGACCGCA
ACGGCCGATG CCAACGCTCG AACCAAACGC CTGGAAGAAT GGGAAAACCT TGGCTGGGAT
GCACTGAACG TTGCCGGCTT CTTCATACCA GGGGCAGGCC CCTTGATGCT GGCCGTCACC
GCTTGCCAGT TGCTGGGCGA GGTATTCGAA GGCTACGAGG CTTGGGAGGA AGGCGACCGC
CACCTTGCCC TGCGCCATCT GGAAGCCGTC GGCCTGAACC TGGGCCTCAT AGGCGGCCTT
GCCGTGGCAG GCCGCGTGGT CCCCAAACTG TTCGGCAGCC CGCTGCTGGA AAACCTCCAG
GAAGTGCCCG GCAACAACGG GGGCTACAAG CTCTGGAATC AGGACCTGAC CCCTTACCGC
AGTAGCATCG AGCTGCCAGA GCATCTGCAA CCCAATGCGC AAGGCCAGTA CCTGCACGAG
GGCCAGCAAT TCATCCGCCT GGACGGCCAT CTTTTCCAGC AGCACTTCGA CAACACGCTG
CAGCAATGGC GCATCATTCA CCCGGACACA GCGGATGCCT GGCAGCCACC GCTGGAACAC
AATGGGCAAG GTGCCTGGCG CGGCCAGCAT GAACAGCCCG CCCAGTGGCC TTTCGCAACA
CTCGTGCGGC GCCTGGGTGA GCCATTCGCA GCGTTCACAC CCCAGCAACT GGAGCAGGCC
GGACGCATCT GCGGCATCGA CGCAGAACGC TTGCGCCAGG TGCACCTGCA AGGCCAGCCA
ACCCCGCCGC TATTGCTCGA CACCCTGCAA CGCATGGCGG CACGGACCGA AGTGCGAGGC
ATGGGTGCAA ACGCAGCGCC GGGTCTGTTC GACCAGCTCT ACAACGGCGA CGCGGCAGTC
GCCCCCGCAA CGCAGCAGCT GCTTACGGCC TACCCACGCC TGTCTCCCGC CTTGGCCAGG
CGGTTGCTGG CACGGCTGGA CGATACTGAA TCACTCACCT GGCAAGAGCA CGGCGAGCTC
CCCAAAGCGA TTGGCCAACA GATCCAACGG GCACACAGCG AGCTGCCGCT GGTACGTGCG
TTGGAAGACT TGTTGCATCC TGCGCAGTGC AGCGCTGACA GTGAGCGCCT GCTGTTCAGC
GCACTGGACG CCCTGCCCGA ATGGCCTGCT GACCTACGCC TTGAGTTGCG CGCTGCAAGC
CCGCAAGGCC CAACGTTGAA CTACGTCGGC AGTGAGCAGG CCACCACCCT GTGCCGGGTG
ATCAAAACGG CCGAAGGCTA TGAGGCCGAT CTGGGAGAGC GCCCGGCGCC CGCGCTGCGT
GATGAGGACC TGTGCCGTGC CGTGGAGCAG GCGCTGCCAC GCGTGCAGCG CGAAGCCCTC
GGCATTGCAC GAAGCGACGG CAGCGTAGTG CGCCAGCGCG TACTGGCGTG GGTCGATAGA
AACAGGCCCG TGCTGGCGCA GCGACTCTGG GGAGCGCCTC TGCAGCGGCG CTCGACACAA
GGCTGGCTAC GCGGCGGCCG CCCCCTGGAG CCGTTGCCAG CGCCCCCGCT TCAGGCCGGT
TCTCTGGCAG CGGCTTACCG CCGCATTTTC CCCGATGCCA CCGATGCGGA GTTCGCCGAC
TGGCTGGGCG ATGAACAGGA AGACCACGAC CTGTATGACA TGCGTACACC CACCGAGCGA
CTGCGAGACC TCCAGCAGCA CCTGAGCGCT CTGCGGCAAA ACCTGCAGCA ATGGGCAAGG
CCCGACCCAT CAAGCCCGCA CCAGCGGCAC CTGGCAGTGC GCCCAATCAT CAACGCCTGG
CGCCGCCTTT CCTGGCTGCC ATTCGGAAGC ACTGGCCGAC TCTTCAGCCT TGACCTTTCC
GGCCTCGACC TGCGCAACGA GGACCTGGCG ACACTCTACC TGCCCGATCA ATTCACCCAC
ATCGAACACA TCACACTTAA CGACAACCCG ATGCTCAGCC ACCTCCCAGC TGATTTTCAC
GAACGTTTCC CCAACCTCAA GCGCCTGTTT CTCACCAATT GCCGCTTCCA GCGCCTACCT
GAACTGACCA GCCCCGAGCA TCTACTCTGG CTGGACCTGG ACAGCAATCG CATTACCTGG
GATAGCCAGG CTCAACGAAC GCTAAACCAG TTCAGCCAAC TAGGCATACT CGATCTGACT
GACAACCCCC TGCTTCAGGC ACCCGACCTG CGTCGGCTTT CCGGGCTCAG GACCGTGTTC
CTGTCCGGTT GTGCGCTCAC CGAATTGCCG CGGGGCCTGC AGCTCATCAG TGAACCTGTG
GTGCTGGACC TTACATCCAA CCAGTTCCAG CAACTGCCTG CCGCGTTCAA TGTTCCACAC
CCGGTAGCTG AATCCCTGAG CCTTGAAAGC GAGTGGCTGG GCCAGACTGC ATTGGCACAA
ATCGATGCCT ACAACACTGC CCACGGTGTC GATCTGATGG TAAACGAAGA TGATTACCTG
GACTTCTTCG AGAACACAGG CCCTGCAGAA GTCGAATTGT GGCAACGCTT GCCACTGCAA
TTTCGCCGTG ACCTTCGGCC ATTGCTCGAC CAAGAGCCCT TCCTGTCGCA GCCGAATCAG
GCCCGCAGGG AATTCTGGAG ACGTTTGACA GTGATCGATA CGAATCAAGC CCTGCGCGAG
GAGTGGCTCA CCCACCCGCC ACGCGACCTT TTCAATCTGC CGCTTTAG
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| Protein sequence | MPDYLPHQAL LKAQLPHWAH RATPKQWAAL QQTQANAWQE QDWFANAAPD LRQAVHASQA
RLVRSQAALA RSLKGLAQIT EFAEPLLQGR LAAHGFHAPL RNSQLLRVES NWHWVGLRYL
YSHRRDNLLQ AALQNFADDE VFTSQSAIAL KDNIHVTAIQ VQGYAPLGMQ VPTAQFPLKS
EHYQVDRLPL SPEAFATLCR ELDLGGTYQA HLTHHLGQPG VRAQAMHVQQ DSLRLAADLA
YLRHLLGGNA RDEIERLLQG DNVTCWQLAL FGSILHEVML IDVGSAGLAL FLPGHDPALR
QCHDLEAVHE ALATLLLEPA ARQAFTAYIR LDERAHFLDL LQQNLDASGN AAFDRPWLRA
AHVDLRPTHQ VIAAEPFGYY QDQHLARLKH EASQLAVPTA TADANARTKR LEEWENLGWD
ALNVAGFFIP GAGPLMLAVT ACQLLGEVFE GYEAWEEGDR HLALRHLEAV GLNLGLIGGL
AVAGRVVPKL FGSPLLENLQ EVPGNNGGYK LWNQDLTPYR SSIELPEHLQ PNAQGQYLHE
GQQFIRLDGH LFQQHFDNTL QQWRIIHPDT ADAWQPPLEH NGQGAWRGQH EQPAQWPFAT
LVRRLGEPFA AFTPQQLEQA GRICGIDAER LRQVHLQGQP TPPLLLDTLQ RMAARTEVRG
MGANAAPGLF DQLYNGDAAV APATQQLLTA YPRLSPALAR RLLARLDDTE SLTWQEHGEL
PKAIGQQIQR AHSELPLVRA LEDLLHPAQC SADSERLLFS ALDALPEWPA DLRLELRAAS
PQGPTLNYVG SEQATTLCRV IKTAEGYEAD LGERPAPALR DEDLCRAVEQ ALPRVQREAL
GIARSDGSVV RQRVLAWVDR NRPVLAQRLW GAPLQRRSTQ GWLRGGRPLE PLPAPPLQAG
SLAAAYRRIF PDATDAEFAD WLGDEQEDHD LYDMRTPTER LRDLQQHLSA LRQNLQQWAR
PDPSSPHQRH LAVRPIINAW RRLSWLPFGS TGRLFSLDLS GLDLRNEDLA TLYLPDQFTH
IEHITLNDNP MLSHLPADFH ERFPNLKRLF LTNCRFQRLP ELTSPEHLLW LDLDSNRITW
DSQAQRTLNQ FSQLGILDLT DNPLLQAPDL RRLSGLRTVF LSGCALTELP RGLQLISEPV
VLDLTSNQFQ QLPAAFNVPH PVAESLSLES EWLGQTALAQ IDAYNTAHGV DLMVNEDDYL
DFFENTGPAE VELWQRLPLQ FRRDLRPLLD QEPFLSQPNQ ARREFWRRLT VIDTNQALRE
EWLTHPPRDL FNLPL
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