| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2378 |
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| Symbol | |
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| ID | 5870167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2662664 |
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| End bp | 2664319 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547502 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001668614 |
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| Protein GI | 167033383 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.81922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCAG ACGCGCCTCC GTCGATTATC CAGTTGCAAG CGCGTGTCGC AGAGCTGGAG
GCGCGCCTGG CAGAGCGCGA AGACACCTCA CAAGCACACG TCAAGCTGCT GGGCGAACTG
CTCGACAGCA GCCTGGCCAA TGTATTCGCT GCCGACCGCA AGATGCGCCT GGTGGCCATC
AACCGTACGG CACGCGAAAC CTTCGAGCGT TACCGAGGTT TCGTACCGCA GATTGGCGAC
CACGTACCGC AGTTTCTGAC CAACCAACCC GACATCATGG ACCGTCTGGC CCCGGTATGG
CCGCGCGTAA TGGCCGGCGA AGCGTTCATC GACACCATCA CCCTCGGGCC CGTTGACGCA
CCACGCCATT ACGAAATTCG TTGCCACCCG TTGCTCGATA TTCAGCAACG CATCCAGGGC
GGCTACATGT TCGCCTATGA CATCACCGAG CGCACGGCCG AACAGCAACG CCTGCGCCAG
GCCGAGGAAG CGTTGCGTCA GTCGCAAAAA ATGGAAGCGG TCGGCCAGTT GACCGGTGGT
ATTGCCCACG ACTTCAATAA CCTGCTGGGC AGCCTGCTAG GTGCGCTGGA ACTGGCCGAG
CAGCGCTTGC GCGAACAACG CCACGCCGAC ACCGCGCGCA TGCTGGAACT TTGCCGCAAC
ACCACGATAC GCGCCGCCAC GCAGGTACAG CGCCTACTGG CCTTCTCGCG CCAGCAAACG
CTGATTCCGC AACCCATCGA TGTGCAGTGC TTGGTTGCCG GTATGCAAGA CTTGATCGCC
AGTTCTACCG GTCCTCACAT TGATTTCCAC GACCAGACAT TGGCCGGACT GTGGCAGATT
CGTATCGATC CGCAGCAACT GGAAAATGCC TTGCTGAACC TGTGCATCAA TGCCCGAGAT
GCCATGCCCT TGGGCGGTAT CCTCAGCATC TCGTGTGCAA ACAGTGACCT TGCTGTGGCC
GAGGCCGGGC AACTGGACCT GCCCGCAGGG CGGTATTTGC ACATTCGCGT CACCGATACC
GGCATGGGCA TGTCCAACGA AGTGATGCAG CGAGCCCTTG AACCCTTCTT CACCACCAAA
CCGCTCGGAC AAGGTACCGG CCTGGGGCTG TCCATGGTCT ATGGCTTCGT CCGCCAGTCC
GGCGGGCAGT TGCAGATCGA AAGCGTGGCT GGGCAAGGCA CGTGCATTCA CCTGTATTTT
CCTCGGGAAG AGTGCATCAG TGCCGACAGC CCACCTGTGC CAGCCACAAC CTGTGTTGTG
CTTTCCGCCC CCCGTGTGCA GCGGGTCATG CTAGTGGAGG ACCAGTCCGC CATGCGCTTG
GTGCTCGTCG AAGTACTGAC TGAACTTGGC CATGAAGTAC AGGCTTTCGA CGTTGGCCGC
CCGGCACTTG AGGCGCTGCA TGCGGGCCCG CTACCGGACT TGCTCATCAC AGATGTCGGC
CTACCCGGAG GTATCGACGG TTATCAGTTG GCAGAGGCGT TTCAAGGGTT TCAGGCCAAC
GCCCCGGTAT TGCTGATCAC CGGCTATGAC GCTGCCGAGC TCCCGCCCAG TACCCGTCCC
GACAGCCGCA CCGAGCTGCT GTCCAAACCG TTCGACCTGC AGAGCTTCTG CAGTCGGGTA
AACCGCTTGC TGGGTATTGC GCCGCCGCAA CGCTGA
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| Protein sequence | MQPDAPPSII QLQARVAELE ARLAEREDTS QAHVKLLGEL LDSSLANVFA ADRKMRLVAI
NRTARETFER YRGFVPQIGD HVPQFLTNQP DIMDRLAPVW PRVMAGEAFI DTITLGPVDA
PRHYEIRCHP LLDIQQRIQG GYMFAYDITE RTAEQQRLRQ AEEALRQSQK MEAVGQLTGG
IAHDFNNLLG SLLGALELAE QRLREQRHAD TARMLELCRN TTIRAATQVQ RLLAFSRQQT
LIPQPIDVQC LVAGMQDLIA SSTGPHIDFH DQTLAGLWQI RIDPQQLENA LLNLCINARD
AMPLGGILSI SCANSDLAVA EAGQLDLPAG RYLHIRVTDT GMGMSNEVMQ RALEPFFTTK
PLGQGTGLGL SMVYGFVRQS GGQLQIESVA GQGTCIHLYF PREECISADS PPVPATTCVV
LSAPRVQRVM LVEDQSAMRL VLVEVLTELG HEVQAFDVGR PALEALHAGP LPDLLITDVG
LPGGIDGYQL AEAFQGFQAN APVLLITGYD AAELPPSTRP DSRTELLSKP FDLQSFCSRV
NRLLGIAPPQ R
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