Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2377 |
Symbol | |
ID | 5870166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2660534 |
End bp | 2662600 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547501 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001668613 |
Protein GI | 167033382 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCC GCGACCTGCT CTCCCTGCGT CAACAAGTCG AAGCTCTGCA ACGGCAGAAC GCACTATTGG AAGCACGTCT TGCCAGCCTT CAAGACCATG ATCAGGGCTT TTACCGGTCG TTGTTCGACA CCATGGACGA AGGCTTTTGC ATCATCGAAT TCTTCGACGG CCCGCACGGT CCGTTGAGTG ACTATGTGCA TGTGCTGGCC AACGCGGCCT ACGCCAAGCA CGCCGGTATT CCCAACGTGG TCGGGCAGAA GCTGCGCGAG ATGGTGCCTG ACGAGGCCGA TGACTGGGTG GCGCGCTATG GCGCTGTACT TCGTACCGGC GCCCCCCTGC ACTTCGAGCA GGAGCTGGTC GCCACCGGCC ATGTGCTATC AGTGACCACT TTTCGCGTAG AGCCAGCCGA AAAGCGTCAG GTAGCCGTGT TGTTCAAGGA CGTGACCGAA CGCCGGCGTG CGGAGCAAGC CCTGCAGCGC CTGAACGAAG AGCTCGAGCA ACGCGTGAAC ACGGCACTGG CAGAGCGACG CTTGTTTGCA GAGTTGGTCG ACCACAGTGT GGTCAATGTG CATGTGCTCG ACAACGACAT GCGCTGGCTG GCCATCAACC GCCAGGCCAA GCTTGATTTC CAGCTGCTGT TTGGGAAAAC CCCGGAAATC GGCGATTGCC TGACAGATCT GATAGATGAT GGGCTTCACG GTCAGGCGCT GAACCTGTCC TTGTGGAAGC GCGCCCTGGC GGGTGAGCAG TTCGTAGAAG TCGGCACCTT CGGCAAGGAG CCCCTGGCGC GCCATTACGA GCTGCGCTTC AACGCCCTGC GCGACCATGA AGGAGAAATA CAAGGGGCCT TTCTGTTCGC CTACGACATC ACTGAGCGGG TGCAAGAGCA GGATCGCTTG GCCAAGGCCG AAGAAGCCCT TCGTCAAGCG CAGAAGATGG AAGCCGTGGG CCAGCTCAGC GGCGGCATCG CCCACGACTT CAACAACTTG CTGGGCGGCA TACTCGGCGC TCAGGAACTG ATGCGCCAAC GCCTGGACCA ATCACGCTTC GACGCCCTGG AGCCGTTGCT GGAGCTGTCC AGCGGCTCGG CGCAGCTGGC CTCTTCGCTG GTGCACCGGC TGCTGGCGTT CTCCCGCCAG CAGACCCTGC AACCCTGCTC CACGCAGGTG GCCACATTGG TGGCCGGCAT GGAAGAGTTG CTGCGCCGCA CCATAGGCCC GGAAATTACC CTGAACAGCC AGTTCGCCAG CCAGCTGTGG CCGACCTTCA TCGACCCGCC ACAACTGGAA AGTGCCCTGC TCAACATTTG CATCAACGCC CGCGACGCAA TGCCTGCGGG TGGTTTGATC GACATCATCG GCGACAACCT GCAAATTGAC GAAGCGCAGG CCCAGGCATT GGAGATACCT GCCGGCGAGT ACGTGCGGCT AAGCATCGTC GACAACGGTA AAGGCATGTC GGCCGAAGTG GCGGAGCGCG CAGTCGACCC GTTTTTCACC ACAAAACCTA TCGGCCAGGG CACCGGCCTG GGATTGTCGA TGACTTACGG CTTCGTGCGC CAATCGGGAG GGCAATTGCG CGTGTTGTCC GTACTTGGTG AAGGTACACG AATCGAGCTG CTGTTCCCAC GACACCATGA GCAACCCAAA GCCCCAGCGC CCAAGGCCCG CGACACGCGA CTTGAAAAAA GCAGCACGGC GGCACGGCGA ATCCTGCTGA TCGAGGACCA GGCGGCCTTG CGCATGGTGG TCGGCGAAGT GCTGGAGGAG CTGGGCTACC AGGTGGACGC TTTCGAGAAT GGCCCGACTG CCCTCGCGCA CCTGCAACGT GGCGAACGGC CAGACCTGCT GCTGAGTGAT ATCGGCCTGC CGGGCGGCCT GAATGGTCGC CAGGTGGCCG AACGCTGCCG TGAGCGCTAC CCAGACATCA AAGTGTTGTT CATCACTGGC TACGACGAAA GCGCGGCGCT CAGCGACGGC CAGTTGCTGC AAGGTACATT GGTGCTGACC AAGCCGTTCG AGCTGGAAGT GCTGGCCGAG CGGGTACGAG AACTGCTGGA GGATTGA
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Protein sequence | MPSRDLLSLR QQVEALQRQN ALLEARLASL QDHDQGFYRS LFDTMDEGFC IIEFFDGPHG PLSDYVHVLA NAAYAKHAGI PNVVGQKLRE MVPDEADDWV ARYGAVLRTG APLHFEQELV ATGHVLSVTT FRVEPAEKRQ VAVLFKDVTE RRRAEQALQR LNEELEQRVN TALAERRLFA ELVDHSVVNV HVLDNDMRWL AINRQAKLDF QLLFGKTPEI GDCLTDLIDD GLHGQALNLS LWKRALAGEQ FVEVGTFGKE PLARHYELRF NALRDHEGEI QGAFLFAYDI TERVQEQDRL AKAEEALRQA QKMEAVGQLS GGIAHDFNNL LGGILGAQEL MRQRLDQSRF DALEPLLELS SGSAQLASSL VHRLLAFSRQ QTLQPCSTQV ATLVAGMEEL LRRTIGPEIT LNSQFASQLW PTFIDPPQLE SALLNICINA RDAMPAGGLI DIIGDNLQID EAQAQALEIP AGEYVRLSIV DNGKGMSAEV AERAVDPFFT TKPIGQGTGL GLSMTYGFVR QSGGQLRVLS VLGEGTRIEL LFPRHHEQPK APAPKARDTR LEKSSTAARR ILLIEDQAAL RMVVGEVLEE LGYQVDAFEN GPTALAHLQR GERPDLLLSD IGLPGGLNGR QVAERCRERY PDIKVLFITG YDESAALSDG QLLQGTLVLT KPFELEVLAE RVRELLED
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