| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2357 |
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| Symbol | |
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| ID | 5870146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2636279 |
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| End bp | 2637277 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547481 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001668593 |
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| Protein GI | 167033362 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.385281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCG ACATCCGCCT GCTGATCCTG CCGTTACCGG ATTTTGCCCT GCTGCCGTTT
GGCGCCTTTC TCGACAAATT GCGCTTCAGC GCCGACGACG AGGACTACAG CCAGCAGCGC
TATTGCAGCT GGACCGTGGC CGGGCTCAGC CTTGACCCGG TGCAATCAAG CAGTGGTGCG
GTGCTGCAGG TCGAGGCGAT TGCCAGCCAG CTCGACCTGA GCAGTTTCGA CTACCTGGTG
GTGTTCGGCG GTCGCAATGC CATGGCCACT GCCGCGCTGG CGCCACGCTA TCAGGCGCTG
CTGCACCAGG CCGGCAAGGC CGGTGTGAAG CTGGTAGGGG TCGATAATGG CGCCTTCCTG
CTGGCCGCCT GCGGACTGCT GCAGGGGCAT GAGGTGGTGG TGCACTGGCG TCACGAAGCC
GAGTTTCGTG CTGCCTTCCC GCAGCTGCGA TTGCTGCGTG AGCAGTTGTA CTGCATCGAT
GGCAATCGCA TCACGTGTGC CGGCGGCACC GCCGCCATCG ACCTGGCTGT TGCGCTGCTC
TCACACGCTT GCGGGCGTAC CCGCGCGCTC AAGGGGCTGG CCGATATGCT GGTGGACGAA
ACCCGCGACA GCCGTCATGC CTTGCGTTCG CTGGAGCTGG GCGCCGGGCA GGGGCGGCAG
GTGCAGCGGG CACAGGCGCT GATGCGCCAT CACCTGGGCT CGCCGTTGGC AGTGGAGCAA
CTGGCCAAGG AACTGGGCAT CAGCCGGCGC CAGCTGGACC GCCAGTTTCA GGCCAGCCAC
GGCATGAGCG CCAAGGCCTG GTGGCTGGAA ATGCGTTTGC AGCAGGCGCG CTGGCGTTTG
CTCAACTCCA GTCATAGCCT GGCGCAGATT GCCGATGAAG TGGGCCTGGG CGATGCCAGC
TACCTGGGCA AGTGCGTGCG CCGTCGGTTT GGCTGTACGG CCTTGGCCTT GCGAGCAGGC
AGCGCTTACT GCGGTGTGCC GAACAGGCCT GTCCAGTAA
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| Protein sequence | MQPDIRLLIL PLPDFALLPF GAFLDKLRFS ADDEDYSQQR YCSWTVAGLS LDPVQSSSGA
VLQVEAIASQ LDLSSFDYLV VFGGRNAMAT AALAPRYQAL LHQAGKAGVK LVGVDNGAFL
LAACGLLQGH EVVVHWRHEA EFRAAFPQLR LLREQLYCID GNRITCAGGT AAIDLAVALL
SHACGRTRAL KGLADMLVDE TRDSRHALRS LELGAGQGRQ VQRAQALMRH HLGSPLAVEQ
LAKELGISRR QLDRQFQASH GMSAKAWWLE MRLQQARWRL LNSSHSLAQI ADEVGLGDAS
YLGKCVRRRF GCTALALRAG SAYCGVPNRP VQ
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