| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2340 |
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| Symbol | |
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| ID | 5870129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2614634 |
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| End bp | 2619460 |
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| Gene Length | 4827 bp |
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| Protein Length | 1608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547465 |
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| Product | hypothetical protein |
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| Protein accession | YP_001668577 |
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| Protein GI | 167033346 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CCCCCTTGTC CCCGCATTTG TCCTTCATTC ACACGCGCAT GCCTTCCTGG
TTCGCGCAGG CGTCCACGGC CGAGCGCCAG TTGCTCAAGC AGCGCGTCAG GCAGAGCCAT
GCCGCGATGC GCCGCCTGCG CGAGGCGCTG GCGCCGGTGC AAAGCATCGA GACCTTCTGC
CGCCCGCTGC TGGAGCAAGC CCTGCAGCGC TGGTTCCCGG ACCAGGTGCT GCCCAAGGTC
GACCAAGCTC GGGTGTGGAG TGATGGCAAC GGCCATAGCT GGCTCGAGGC AGCCTTGCAG
AACTTCGATG CCGGCGCTCG CGTCACCCTG TACGACTCGG CCACCCGCCT TGAAAAGCGC
TCGGGCGAAC AAGCGGCCAC CTTCGTCAGC GGCGTACGCA ATCTCGACCT CGGTCAGCGC
TATCGCTATC ACCTGGGCGA CCATATAGAT ACCGACGGTT TTCGCGACCT GGTGCGCCAG
TACGCCCGGG CCACCTTCGC TGCCGAGCTG ACCCAGGCTA CGCTGCAAGG GCATCTGGAT
GCCGAGGGTG CACTGATGGG TGAAACGATA TTCGCCGGTC TAGCCGAATC AGCACGCAGT
CAGTTGCAAT GCGGCTTCCT CAGCCTGTTC GGCATCCCCT TGCATGGCCC TATGCTGGTC
CGCCTCGCAC CGCGCGATGC TGTCGAGCGA TGCCTGCTGT ATCTGCCAGG TCATCCTGGT
CAGCCACTGC GCCAGTACCC CTCAGCGCAG GCCGCGAGCA CGGCGCTCAC CCAGATGCTG
TGGCAGCAAG AGGAGCGCGA GTACTTCACT CGCTTTGTCT GTCTTGCCGA GCAACCTCTT
TTCAGCGCAC GGCTGCGTCA GATCCTGTAC CCGCGCTACC CATATGCCGA GCTGCATCCA
TCTGCTCCCG TGCTGGAGAA AGGCGAACGC TTCAGCTGGC TCAAACGCGT GTTTCCTGCC
ACTACCGACC TCTGGCAGGA AACCCTCGAC AAGAACGCGA GGCTGGACAT CACCTTCACG
CCGTGGCCTA GGGATGGCTT CGTCGAGTAC GCGCGCATCG AGGTCGAGCG ACGCATGCAG
GATGCCGCCA TCCTGGCCGT TCCAGTCGCC CAACGTGATG CCGATGCCCA GTTAGCCCGC
ATCCAGAGCT GGCTGGGCGT CGGCCTGACC GTGCTCAACC TGGCGGGATT CTTCGTGCCC
GGTCTGGGCG AGGTGATGCT GGTCATCGGC GGTGCGCAGG TGGTCGACGA ATTCCTCGAC
GGCGTGCACG CCGCCAACGA AGGCGATGCC GATGCCGCGA TCGGTCACCT GTTCGACGTG
CTGGCAAGCC TTGCACAGTT CGCCGCCCTA GGCGCCGCGG GACGCTTCAT CGAACCTCAG
GGCATCTTGC ACAGCTGGCA ACCAGTAGGC ACCGACGGTG AACAGCGACT GTGGTCCGGT
GAGCTGACAC CCTTTTCCCG CCCCCGGCCC TGGCCACTCG GCCAGGCCCG TGATGGCCGA
GGCCTGTACC TGTGGGAGGG CAAGCCATGG TTCGAGCGCG ACGGGCAGGC GCTGCCGCTC
GAACAGGTCA CAGACGGCAC CGCTCGCCTG CCATCGGTCC GGGGACAGCG GCACCAGCCT
ACACTGCTCG GCAACGGCCA GGGCACATGG CTGTTCGAAC ACGATCGCCC CTTGGACTGG
CAGGCCGACA CCCTGCTCGA ACACCTGGGC CCCGCTGCCC AAGGCCTGGA TGCGCAAACC
CTCGGCAAAG CGTTGCAATG CAGCGGCTAC GATGCCGCAG CGCTGCGCCG AGTGTTGCTG
GATCACAGAC CAACCCCCGC GTTGCTGCTC GAAAGCCTCG AAGCTCTCGG CGCACATCCG
ATCGGCGTCC CGGCCAACGA ACAGCCGTTG ACCGCCATCC TGGCTCGCGA CTTCCCATCG
CTCACCCAGG CAAGCCGCTC GGAGATCCTC GCCCAGGCGT CGGCCAGCGA CATCGCCCGG
CTACAGCAAT CGGGGCGCTT GCCCTTGCGG CTGGCCGAGA CCGCACGGCT GTACCTGCGT
GAAAGCCGCA TCGGCAAGGC CCTTGCCCGC TTCCACCATG GCAACGGCGC CACCACCGAC
CGCGATGCCC TGGCATTCGC CGCGTTACGG CGTCTGCCTG GATGGCGCGG CAAGCTGCGC
CTCGAACTGC GCGACTCGAA CCTCAGGGGG CGGCTGCTCG CCAGCACAGG CGAGCAAGGG
CTGCCCACCA AGACCCTGGT GCGCAACGCC GATGGATATA CCCCCCATGA CGCGTTCGGC
AACGAGCTGG CGGGGCGCAG CGATGTATAC CGCGCGATGC TGCAGGCGTT GCCCGACAGC
GAACGTGACG CACTCGGGCT GCTGATCCAT GAGCAGGGCA AGCTGCGCGA CAACCTGTTC
GAACTGGCCG CCCGTGACCG TCGGCAAGCC GCTCTGGACC TAGGCATGAC ACCGGTTCGA
CCGATGTACC GACTGCCCAC CCGCCTACCC GGTGATCGTC GTATCGGCTA TCGCCTCAGT
GGCCGAGGAC GCGCTTACTG GACTGAAGAC GAGCTGTTCG ATCAACTGTT CCCCGCCACA
CCGCAAGGCG ACCGGGAGAT GCTGCGCCAG CGCCTGCGCC ACCAGGCCGG CCCGTCTGCC
GGCGCGTTCG GTCGCATGCT GTCGCGACTG CTGGTGGACT ACCGCCGACT CGACAGCGTA
CTGCAACGCT GGGTACACGC CCCCGAGGGC CTCCTGCCCG GTGCGCAGGA ACAGCAACAT
GGATTGCGCG AAACCTTCGC GCAACGCATT CGCAGTGCGT GGCGCCGGGA AAGCGCAGAA
GGGCCGCACG ACAACATCGA CGATATCAAC CTGGTGCTGG AGGGGCATGG CCTGACCAGC
GTACCCGCTT TGCCCATAGG CCTGCCTCAC GTTCGCCTGC TCAACCTCAA CGGTCTCAAC
ACCCCAGACA TGCCCGGCCT GAACGCGTTT CTCGAAGCCT TTCCCGGCCT GCGCCTGCTT
GACCTGGCGG AAAACAGCCT CAGCCGCCTG CCCCAGGCAT TGGCCGAGAT GCACGAACTG
CAGGCACTGG ATATCTCGGA AAACAACATT GACCTGGACG GGGAGGAAAG CCTCGCGCTG
CTCGAACGTA TGCCCCACTT GCAACGGCTC AACCTCACCG ATGGCATTCA CACCCTCTCG
GTGACTACGC TCGAGCGCCT CAGCGCCCTG CCGTCGCTGG CCTGGTTCCA GGCCGACCTC
AACCACCTGA TCATGACCGC CGAACACTTT CAGGCCCTGC AACGCTGGCC GGCCTTGATC
GGGTTGAGCC TGGCTCAGAA CGCGATCGTG CTGGATGAGG CTGCACGTAC CGCACTGGCC
GGGCTCAACC GTCTGGAGAT GCTGTCGCTG TACGAAAACC CGCTGGCCCT GGCCCCCGAC
TTGAGCGGCT GGACACGCCT GCAGCGACTG GACCTGGAAC TGACCAACAT CAGCCAATGG
CCGGCGGGGC TCGAGGCCCT CATGAACCAG GAGCCTCTGG TGCTGCGCCA GCTGGACCTG
AGCGCCAACG AGCTCGCCGT TACCCCCGAC CTGAGCCAGA CAGCCTTTGC CCGCGCGGTA
CGCGATCACC TCGAAGGCAT TGCCTATTCC TTCAACGGCA ATCCTTTCGA CGAAGCGGCC
CTGGCCAATC TCGAACAGGC CGGCTTCACC ACCCTCCCAG CCCTTGCACA GGCCAACCCT
TGGGCCGCCG ACTGGCCTGA GTCGTTGCGT TTGCACATTG CCGAAACGGC TGACGATCCA
CAGTGGCAGC CGCTCTACAA CCTACTCGAA CGGCTGCCCG ATACACAGGA CTTCCTGGAC
GCCCCAACCC AGATGCGCCA GCGCATGCAA CACGTGGTCG AAATGCTGTC CAGCACGCAA
GAAGGCGAAG CCGATACCGG CTGGGGCCGG GCGCAGGTGC AGCAGCAGAT CAACGACCTG
CTCGAGGACG CCACCCAGGA GTGCGTGGAC CAGGCCATCG TGCTGTTCCA GCAAGTCGAG
ACGCAAGTGA CGGTGTGGCA GACGGTCGCC CATGCCGCGG CTGCCGAAGC CGACGAACAG
GTTGCCGTGG ACAGTGCCCG CGCGCTGCTG CGCCAGCGCC TGCTCGACGA ACGCGTCGGC
GCTCTTTATC AGGCGCGGCT GGCCAGACGC AGGGCCTTGC GGGCCGATGA CCATCACCCG
ACGGACAACC CCGTTCCAGC CCTGCACCCC GACGATGGCA TCAGCGATCG GGAACTGGTC
AGCGATCACC CCGACGAACT GGAGATGGCC CTGCATGCGC GTATCCAGCT ACGACAGAGG
CTGAACCTGC CGCCGCAACC GCAGGCCATG CGTTTCCCGC AACTGGCGCA CCTCGATGAG
CCGACCCTGC AACGCCTGGG TGATGCCGTG ATCGAGGGCA CGAGTGCCTC CGCCCTCGAA
CACTGGGCAG TGGACCAACC CTTCTGGCGA GCCTGGCTGC GCCGTTTACG GCCACTGGCC
TTCGAAAGGC TGGCCGAACG CTGGATGGGC GCCTCCGAAT ATTTCGACAC GCTCACTGAC
CCGTCGGCCG AAGCGGGTGC CTATACCGGC CCCGCAGTGC CAGCGCTCTA CATCGACGCA
CTGGAGCGTG AGGTGGGCGA TGTGGATGGG CTTGCCTGGC GCTTGAACGG CGTGCTGCAA
CGCGTCAACC TGGCCAGCGG TCGCTATCCC AACGAGAACA CCCTCTACCA GAGAGCCGCG
GACCTGCTGC TGCGTTGTCG CAAGGAAGAT GAAGCCGAAC TGCTGCGCGA GCTGACCGAA
ACCATGGTCC AGGCCCACCG CGAATGA
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| Protein sequence | MTQPPLSPHL SFIHTRMPSW FAQASTAERQ LLKQRVRQSH AAMRRLREAL APVQSIETFC
RPLLEQALQR WFPDQVLPKV DQARVWSDGN GHSWLEAALQ NFDAGARVTL YDSATRLEKR
SGEQAATFVS GVRNLDLGQR YRYHLGDHID TDGFRDLVRQ YARATFAAEL TQATLQGHLD
AEGALMGETI FAGLAESARS QLQCGFLSLF GIPLHGPMLV RLAPRDAVER CLLYLPGHPG
QPLRQYPSAQ AASTALTQML WQQEEREYFT RFVCLAEQPL FSARLRQILY PRYPYAELHP
SAPVLEKGER FSWLKRVFPA TTDLWQETLD KNARLDITFT PWPRDGFVEY ARIEVERRMQ
DAAILAVPVA QRDADAQLAR IQSWLGVGLT VLNLAGFFVP GLGEVMLVIG GAQVVDEFLD
GVHAANEGDA DAAIGHLFDV LASLAQFAAL GAAGRFIEPQ GILHSWQPVG TDGEQRLWSG
ELTPFSRPRP WPLGQARDGR GLYLWEGKPW FERDGQALPL EQVTDGTARL PSVRGQRHQP
TLLGNGQGTW LFEHDRPLDW QADTLLEHLG PAAQGLDAQT LGKALQCSGY DAAALRRVLL
DHRPTPALLL ESLEALGAHP IGVPANEQPL TAILARDFPS LTQASRSEIL AQASASDIAR
LQQSGRLPLR LAETARLYLR ESRIGKALAR FHHGNGATTD RDALAFAALR RLPGWRGKLR
LELRDSNLRG RLLASTGEQG LPTKTLVRNA DGYTPHDAFG NELAGRSDVY RAMLQALPDS
ERDALGLLIH EQGKLRDNLF ELAARDRRQA ALDLGMTPVR PMYRLPTRLP GDRRIGYRLS
GRGRAYWTED ELFDQLFPAT PQGDREMLRQ RLRHQAGPSA GAFGRMLSRL LVDYRRLDSV
LQRWVHAPEG LLPGAQEQQH GLRETFAQRI RSAWRRESAE GPHDNIDDIN LVLEGHGLTS
VPALPIGLPH VRLLNLNGLN TPDMPGLNAF LEAFPGLRLL DLAENSLSRL PQALAEMHEL
QALDISENNI DLDGEESLAL LERMPHLQRL NLTDGIHTLS VTTLERLSAL PSLAWFQADL
NHLIMTAEHF QALQRWPALI GLSLAQNAIV LDEAARTALA GLNRLEMLSL YENPLALAPD
LSGWTRLQRL DLELTNISQW PAGLEALMNQ EPLVLRQLDL SANELAVTPD LSQTAFARAV
RDHLEGIAYS FNGNPFDEAA LANLEQAGFT TLPALAQANP WAADWPESLR LHIAETADDP
QWQPLYNLLE RLPDTQDFLD APTQMRQRMQ HVVEMLSSTQ EGEADTGWGR AQVQQQINDL
LEDATQECVD QAIVLFQQVE TQVTVWQTVA HAAAAEADEQ VAVDSARALL RQRLLDERVG
ALYQARLARR RALRADDHHP TDNPVPALHP DDGISDRELV SDHPDELEMA LHARIQLRQR
LNLPPQPQAM RFPQLAHLDE PTLQRLGDAV IEGTSASALE HWAVDQPFWR AWLRRLRPLA
FERLAERWMG ASEYFDTLTD PSAEAGAYTG PAVPALYIDA LEREVGDVDG LAWRLNGVLQ
RVNLASGRYP NENTLYQRAA DLLLRCRKED EAELLRELTE TMVQAHRE
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