Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2277 |
Symbol | |
ID | 5870066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2540311 |
End bp | 2541066 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547402 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001668514 |
Protein GI | 167033283 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.554921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCC ATGTCGTACA TGCCGGCCTT GGGCTGGCCG GGTTGTTGGC CTTGTTGCTG TTGTGGTGGG CCGGTGTTGC CATGTTCGGC CAGGCCGACG GCCTGTCGGC GCGCTTTTCA CCGGCGGCTA CCTTGGCCAG TCTGGTCGAG CTGTTGGGGC AGGGCGAGGT CTACGGGCAT ATCTGGGTCA GCCTCAAGCG TATCCTGGTC GGGCTGCTGC TGGCGCTGCT GATAGGGGTA CCGTTGGGCT TGCTGGTTGG CAGCTACCGG CACCTGGAGG CGGCGACCAC GCCGGCGTTC CAGTTTTTGC GCATGATCTC GCCATTGTCG TGGATGCCGG TGGTGGTGAT GCTGATGGGC GTGGGTGACC AGCCGATCTA CTTCCTGCTG GCGTTTGCCG CGTTGTGGCC GATCTTGCTG AACACCGCGG CAGGGGTACG GCAACTGGAC GCACGCTGGC TGCAACTGAG CCGCAGCTTG AGCGCCACGC GTTGGGAGAC CTTGTGCAAG GTGATCGTGC CGGGGGTGAT CGGCCATGTG CTGACCGGGG TGCGTCTGGC CATCGGTATT CTGTGGATCG TGCTGGTACC GTGCGAAATG CTGGGCGTGA GTGCGGGGCT TGGGTATTTC ATTCTCGATA CCCGCGACCG GCTGGCGTAC TCCGAGCTGA TGGCGATGGT GCTGCTGATT GGCGTGCTGG GGTTTGTGTT GGATGCCCTG GCGCGTGGGC TGCATCGACG CTGGGTACAC GGTTGA
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Protein sequence | MRTHVVHAGL GLAGLLALLL LWWAGVAMFG QADGLSARFS PAATLASLVE LLGQGEVYGH IWVSLKRILV GLLLALLIGV PLGLLVGSYR HLEAATTPAF QFLRMISPLS WMPVVVMLMG VGDQPIYFLL AFAALWPILL NTAAGVRQLD ARWLQLSRSL SATRWETLCK VIVPGVIGHV LTGVRLAIGI LWIVLVPCEM LGVSAGLGYF ILDTRDRLAY SELMAMVLLI GVLGFVLDAL ARGLHRRWVH G
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