| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2251 |
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| Symbol | |
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| ID | 5870040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2512323 |
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| End bp | 2513627 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547376 |
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| Product | ammonium transporter |
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| Protein accession | YP_001668488 |
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| Protein GI | 167033257 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.163851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACC TCACCCTCGC TGTAATGTTG TTAGCCCTGG CCACCCAGGC CACTGCCGCC
GAAACCACCC TGGACACCGG CAACACCGCC TGGATGATCT GCGCCGCGAT GTTCGTGCTG
ATGATGTGCA TCCCCGGCCT GGCGATGTTT TACGGCGGCA TGGTGCGGGC CAAGAACTTT
CTTTCGGTGT TCACCCAGCT GTTCGCCGTG GCCGGCGTTA TCGGCATTAT CTGGGTGCTG
TTCGGCTACA GTCTGGTGGT CGATACCACC GGCATGGTCG AGGGCCAGCT CACCTTCAAC
AGTTTCATCG GCGGGTTGGA CAAGGCGCTG ATGCTGGATA TCGGCCATGA CAGCCTGGTC
GGCACCATCC CCGAAGGTGT GTTTGCGGTG TTTCAGCTGA CGTTCGCCAT CATCACCCCA
GCGCTGATTG CCGGTGGTTT TGCCGAGCGC ATGAAGTTCA CCGCCTCGTT GCTGTTCATG
ACGGCGTGGT TCGTGCTGGT GTATGCACCT ATTGCCCATA TGGTATGGGG CGGGCCGGGG
GCACTGATGG TCAACTGGGG GGTGCTGGAC TTCGCCGGCG GCACTGCGGT GCACATCAAT
TCCGGCGTGG CGGCCTTGGC GGCGGCGTTG ATGCTGGGCA AGCGCAAGGG CTACCCGCAG
GTGGCCATGC CGCCGCATAA CCTGGGTTTT ACTCTGGTGG GCGCGGGGTT GTTGTGGGTG
GGCTGGTTCG GCTTCAACGT TGGGTCGGGG CTTGCCGCGA ACCAGGGGGC AGGGGTGGTG
ATGCTGGCGA CCATGGTGGC GGCCTGCGCG GGGATTGTCG GTTGGTTGCT GACCGAGAAG
GTGATGCATG GTCGACCGAC TGCCTTGGGT GCTGCGTCGG GGGCACTGGC GGGGCTGGTG
GGTATTACAC CGGCCTGCGC ATTCGTCGGG CCGCTGGGGG CACTGGTGAT CGGTGTGTTG
ACCGGGGCCA TCTGCTTCTT TGCCGTGACC CGGCTCAAGC AGGCGCTAGG GTATGACGAC
AGCCTTGATG TGTTCGGGCT GCATGGTGTG GGTGGGATGG TCGGGGCGAT TCTGACCGGT
GTGTTTGCCG CGCCGGCACT GGGTGGCTAT GTGGAAGGCG CATCGCCCAT TGGGCAAGCA
CTGGTGCAGT TGAAGGGTGT GGCGTTCACC TTCGTTTACT GCTTCGTGGT GAGCTGGGTA
ATTCTCGCGG CCATCAAGCT GACCATCGGG TTGCGGGCCA GCCGAGAGGA AGAAGAGCAA
GGGCTGGACC TGGCGGAGCA CAATGAGCGC GCTTATAACC TTTGA
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| Protein sequence | MKHLTLAVML LALATQATAA ETTLDTGNTA WMICAAMFVL MMCIPGLAMF YGGMVRAKNF
LSVFTQLFAV AGVIGIIWVL FGYSLVVDTT GMVEGQLTFN SFIGGLDKAL MLDIGHDSLV
GTIPEGVFAV FQLTFAIITP ALIAGGFAER MKFTASLLFM TAWFVLVYAP IAHMVWGGPG
ALMVNWGVLD FAGGTAVHIN SGVAALAAAL MLGKRKGYPQ VAMPPHNLGF TLVGAGLLWV
GWFGFNVGSG LAANQGAGVV MLATMVAACA GIVGWLLTEK VMHGRPTALG AASGALAGLV
GITPACAFVG PLGALVIGVL TGAICFFAVT RLKQALGYDD SLDVFGLHGV GGMVGAILTG
VFAAPALGGY VEGASPIGQA LVQLKGVAFT FVYCFVVSWV ILAAIKLTIG LRASREEEEQ
GLDLAEHNER AYNL
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