| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2247 |
|---|
| Symbol | |
|---|
| ID | 5870036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2507834 |
|---|
| End bp | 2509168 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641547372 |
|---|
| Product | glutamine synthetase, type III |
|---|
| Protein accession | YP_001668484 |
|---|
| Protein GI | 167033253 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I
[TIGR03105] glutamine synthetase, type III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.238317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCAG CAGAAACCCA GCGCACGCTC GACCAACACG GCATCAAGTA CGTGCTGGCG
CAGTTCGTCG ATATTCATGG CTCGGCGAAG ACCAAATCGG TGCCGGTCTC CGGCCTGAAG
ATGGTCGCCG AAGAGGGCGC CGGTTTTGCC GGCTTCGCCA TCTGCGGCAT GGGCATGGAG
CCACACGGAC CGGACTTCAT GGCCCGCGGC GACCTGACGA CCTTGATTCC GGTGCCATGG
CAGCCGGGTT ATGGCCGCGT GGTATGCGTG GGCCATGTAA ACGGCCAGCC GTGGCCCTAC
GACAGCCGTC ACGTGTTGCA ACAGCAGGTG CAGCGCCTGG CCGAAAAGGG GTGGACGCTG
AACACCGGCC TTGAGCCCGA GTTCAGCCTG TTTCGCCGCG ACGAGGGTGG CAAGCTGCAA
CTGGTGGATG CCTCCGACAA CCTCGACAAG CCGTGTTACG ACTACAAGGG CCTGTCACGC
TCGCGGCTGT TCCTCGAGCG CCTGACCGAG GCGTTGCAAC CGGTGGGTTT CGACATCTAC
CAGATCGACC ACGAAGACGC CAACGGCCAG TTCGAGATCA ACTACACCTA CAGTGACGCC
ATGGAGTCGG CCGACCGTTT CACCTTCTTC CGCATGGCCG CCGGCGAGAT CGCCAACGAC
CTGGGGATGA TCTGCTCGTT CATGCCCAAG CCCGACCCCA AGCGCGCTGG CAATGGCATG
CACTTTCATC TGTCGCTGGC CAGCAGCACC AACAAGAACC TGTTCCACGA CCCGTCCGAC
AGCAGCGGCA TGGGCCTGTC GAAGCTGGCC TACCACTTTG CTGCAGGGCT GCTGGCCCAC
GGCCCGGCGT TGTGTGCCTT CGCGGCGCCA ACGGTCAACT CCTACAAGCG TCTGGTGGTG
GGGCGCTCGT TGTCGGGTTC GACGTGGGCC CCGGCCTTCG TAGCCTGGGG GGCCAACAAC
CGCTCGGCGA TGGTGCGCAT TCCTTATGGT CGCCTGGAAT TCCGCTTGCC GGACGCCGGT
TGCAACCCGT ACCTGGTCAC CGCCGCAATC ATTGCCGCCG GCCTCGATGG CATCGACCGC
CAGTTGGAGC CAGGCGAGAT GTGCAATGAA AACCTCTACA ACCTGAGCCT TGAAGACATT
GCCGCGCGCG GCATCAAAAC CCTGCCGCAA TCGCTGAAGG AAGCCGTTGA CGCACTTCAA
ACCGACCCGC TGTTCCGCGA GGTGCTGGGC GCCGAGATCG TCGACGAGTT CATCAAGCTC
AAGCGCATGG AGTGGGTGGA GTACTGCCGG CACGTTTCCG ACTGGGAAAT CCAGCGCTAC
ACCGAATTCT TCTGA
|
|---|
| Protein sequence | MLPAETQRTL DQHGIKYVLA QFVDIHGSAK TKSVPVSGLK MVAEEGAGFA GFAICGMGME
PHGPDFMARG DLTTLIPVPW QPGYGRVVCV GHVNGQPWPY DSRHVLQQQV QRLAEKGWTL
NTGLEPEFSL FRRDEGGKLQ LVDASDNLDK PCYDYKGLSR SRLFLERLTE ALQPVGFDIY
QIDHEDANGQ FEINYTYSDA MESADRFTFF RMAAGEIAND LGMICSFMPK PDPKRAGNGM
HFHLSLASST NKNLFHDPSD SSGMGLSKLA YHFAAGLLAH GPALCAFAAP TVNSYKRLVV
GRSLSGSTWA PAFVAWGANN RSAMVRIPYG RLEFRLPDAG CNPYLVTAAI IAAGLDGIDR
QLEPGEMCNE NLYNLSLEDI AARGIKTLPQ SLKEAVDALQ TDPLFREVLG AEIVDEFIKL
KRMEWVEYCR HVSDWEIQRY TEFF
|
|---|
| |