| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2239 |
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| Symbol | |
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| ID | 5870028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2498632 |
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| End bp | 2499798 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547364 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001668476 |
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| Protein GI | 167033245 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.942581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTAG ATCCACCCAC GATGTTGACC ATTTCGGTTG CCTTGGCTGC TGCCGCTGCC
TTGTACCTGG CAATTGAATG GCGCAGTGTC CGCGAAACCT CTCTGCTGTT CTGGAGCGCC
GGTTTCGCCA CCATTACTGT CGGTTGCATC CTGGCTTTGC TGCGCGGGAT CGGTTTGTTG
TTCATCGGCA TCTGGTTCGC CAATGGCTTG CTGGTGGTCG CGCACGGTTT TTTTCTGATG
GGCGTGCTGC GATTTACCCA GGAGCGCTTG TCGCGTGCCT GGCTGATGAT CGTGGTGGTC
TGGTTCGCCT TGCTGCTGTT GCCTGTGGGG CCGCAGTGGT CGAAGGTGAT GCTGATGGTC
AACTCGTTGC TGGTGGCGGC GTTGACGCTC AAGGCCAGTT TCCTGTTGCG GCCGCATGGC
AGATCGCTGA GTGTTGGCGC GGTGCAGTTG CGCTATGTGC TGCTGATTCA TGGGGCATTC
TATGTAGCCA AGGCGATCAT TGCGATTACG CCGGGTACGT TGATTGACCT GGCCACCTTT
GGCGGGCTGA TCATTCAGGT TTCCCTGGTC GAGGGGGCGA TGGCGATCAT GCTGATTGCC
TTGTCGATGA CGGGAACCGT GCGTTACCGG CGTGAGGAAC GGATTGCCCG GCTGGCGGCC
CGTGATCCGC TGACCGCGCT GTACAACCGG CGAGCGCTGG AGGTGCGGGC TGGGCATTTC
TTCAAGGACG TGAGCCCTGC GCAACCTGGG GCGTTACTGC TGATCGACAT CGACAATTTC
AAGCTGGTCA ACGACCTGCA CGGGCATATA GCCGGGGACC GCTTGCTGAT TGCCTTGAGC
GAGATGATTC GCACGGCGCT GCCCGAGCGC TCGCTGGCGG CGCGGTTGGG GGGCGATGAG
TTTGTCATCT TGCTGAGTGG GGCGAGTAGT GAACGGGTCA TGGAGCTGGG TGGGATGCTG
CGTGAGCAGT TCCAGCAGTA CGCCTGCAAG ACCGTGCCAA CGCCGCAGGC GGTTACCTTG
AGCATCGGTG CCAACCTGTT CGACCAGCCA CCGGCGAGCC TGGCGGCGTT GATCGAGCAG
GGGGATGTGG CGCTGTACCA GTCCAAGCGT GGAGGGCGCG ACAGCATTCG GTTTGTCGAG
CGGCCCATGG CAGACATTAG CCACTAG
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| Protein sequence | MALDPPTMLT ISVALAAAAA LYLAIEWRSV RETSLLFWSA GFATITVGCI LALLRGIGLL
FIGIWFANGL LVVAHGFFLM GVLRFTQERL SRAWLMIVVV WFALLLLPVG PQWSKVMLMV
NSLLVAALTL KASFLLRPHG RSLSVGAVQL RYVLLIHGAF YVAKAIIAIT PGTLIDLATF
GGLIIQVSLV EGAMAIMLIA LSMTGTVRYR REERIARLAA RDPLTALYNR RALEVRAGHF
FKDVSPAQPG ALLLIDIDNF KLVNDLHGHI AGDRLLIALS EMIRTALPER SLAARLGGDE
FVILLSGASS ERVMELGGML REQFQQYACK TVPTPQAVTL SIGANLFDQP PASLAALIEQ
GDVALYQSKR GGRDSIRFVE RPMADISH
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