| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2217 |
|---|
| Symbol | |
|---|
| ID | 5870006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2473801 |
|---|
| End bp | 2475120 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641547342 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668454 |
|---|
| Protein GI | 167033223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCACC GCCCATTCCG CCTCACCTTG GCCGCACTGT TGGCCGGGGC TTCGCTGGGC
ACCTGCGCGC AGGAGCTTTA CAGCGATGCC GAGCGCCACC TGAACGCCAA TGTCGAAGCC
GTGTTCGGTG TATTCCACAG CGAGGAAAGC TACGCCGTCG CGCGCGACCA GCCCGGCTCC
ACATCATGGC GCGAGGGCTA TGTAAAATAC GGCCTGAGCG GTGACCAACG CCTGGGCAGT
GCCGGTTCGC TGTACGGCGC TTTCGCCTTG CTCAGCTCTG GCACCTGGGG CGACGGCGAC
GCCGCCGGCT TCAGCGATGG CAGCGAACGC ACCACCAAGA TCGAGGACGC CTACCTGGGC
TGGAAGTCCG GCAACCTGGT GCCACTGCTT GGCGAAGACG GCATCGACCT GTCGTTTGGT
AAGCAGATGG TCGCGGTAGG CGATGGTTTC CTGATCCAGG GCGATTCCTT GAATGTTGGC
CACGGCCTGG CTAATGGCGA GTTCAACCGT GGCGGCGCGT ACTACCTGGC TGCGCGCAAG
AGCTTCGACA AAACCGCCGT GTTGCGCCTT GGCGGCAGCA AAGGCTGGCG CGGCGATCTG
ATGTGGCTGC AGTCGGACAA CCGCGCCCAG GCCAACACCG AAATGCATGT GGCCACCCTG
GAGCATGTGG CAGACGCGGG TACGGTCGGG CTGACCTACA TCGACACCAC CCATATCGAC
AAGCAATACG CCTCGCCGAT GCAGCAGGAA CGCGACGGCA TGAAGACCTA CAGCATTCGT
GGCCAGGGCA ATGCCGGGGT GGAGAACCTG TTCCTGTCTG GCGAATATGC CAAGCAGGAC
AAACCGCACG CCGCGACTGA AGACGCCTGG TATCTGGAAG CTGGCTGGAC CTTTGCCGAC
CTGCCCTGGG CACCGAACGT CAGCTACCGC TACAGCCGGT TCTCGGAGCA ATACGACACG
CTGTTCTATG GCCTGGGCCG TGGGTTGGGC ACCTGGTTTC AAGGCGAGGT GGCGGGCAAC
TATGCCGGGC CGTTCAACAG CAATGCGCGG ATCCAGAAGG TGGGGTTGAC GGTAAGCCCG
GCTTCGTCAC TGAACGTGGG GCTGATGGGC TTCAAGTTCG ACACGATCGA CCGCAGCCTG
GGCAATGTAG ATGGCCACGA GGTGGACCTG TATGCGGAGT GGACCCTCAA CGAGCACCTG
ATGATAGTGC CACTGGTGGG GCTGTACACG CCTGAGCGCA GTGCCGAGCA AGGCGGTACA
CAGTTGGGCA ATGACAACAA CAACCTGTAC AGCCAGGTTG TGTTCGTCAG TACCTTCTAA
|
|---|
| Protein sequence | MHHRPFRLTL AALLAGASLG TCAQELYSDA ERHLNANVEA VFGVFHSEES YAVARDQPGS
TSWREGYVKY GLSGDQRLGS AGSLYGAFAL LSSGTWGDGD AAGFSDGSER TTKIEDAYLG
WKSGNLVPLL GEDGIDLSFG KQMVAVGDGF LIQGDSLNVG HGLANGEFNR GGAYYLAARK
SFDKTAVLRL GGSKGWRGDL MWLQSDNRAQ ANTEMHVATL EHVADAGTVG LTYIDTTHID
KQYASPMQQE RDGMKTYSIR GQGNAGVENL FLSGEYAKQD KPHAATEDAW YLEAGWTFAD
LPWAPNVSYR YSRFSEQYDT LFYGLGRGLG TWFQGEVAGN YAGPFNSNAR IQKVGLTVSP
ASSLNVGLMG FKFDTIDRSL GNVDGHEVDL YAEWTLNEHL MIVPLVGLYT PERSAEQGGT
QLGNDNNNLY SQVVFVSTF
|
|---|
| |