| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2184 |
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| Symbol | alr |
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| ID | 5869973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2437074 |
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| End bp | 2438303 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547309 |
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| Product | alanine racemase |
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| Protein accession | YP_001668421 |
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| Protein GI | 167033190 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.44878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTC GCCGCACCCT TCTGGCCGCA TCCCTGGCCC TGCTGATCAC TGGCCAGGCC
CCCCTGTATG CCGCACCGCC GTTGTCGATG GACAACGGCA CCAACGCCCT GACCGTGCAG
AACAGCAACG CCTGGGTCGA AGTCAGCGCC AGCGCCCTGC AACACAACAT CCGCACCTTG
CAGGCCGAGC TGGCCGGCAA GTCCAAACTG TGCGCCGTGC TCAAGGCTGA TGCCTATGGC
CACGGCATCG GCCTGGTGAT GCCGTCGATC ATCGCCCAGG GCGTGCCCTG CGTGGCGGTA
GCCAGCAACG AGGAAGCCCG CGTGGTCCGC GCCAGCGGTT TCACCGGGCA ACTGGTGCGG
GTGCGCCTGG CCAGCCTCAG CGAGCTGGAA GATGCCTTGC AGTACGACAT GGAAGAACTG
GTCGGTAGCG CCGAGTTCGC CCGCCAGGTT GACGCCATCG CCGCGCGCCA TGGCAAGACC
TTGCGTATCC ATATGGCACT CAACTCCAGC GGTATGAGCC GCAATGGGGT GGAAATGGGC
AGCTGGTCCG GTCGTGGCGA AGCGCTGCAG ATCACCGACC AGAAACACCT CGAGCTGGTT
GCGTTGATGA CCCACTTCGC CGTCGAAGAC AAGGACGATG TGCGCAAGGG CCTGGCGGCA
TTCAATGAGC AGACCGATTG GCTGATCAAG CACGCCAAGC TCGACCGCAG CAAGCTCACC
CTGCATGCGG CCAACTCGTT CGCCACCCTG GAAGTGCCGG AGGCGCGCCT GGACATGGTG
CGCACCGGTG GCGCGCTGTT CGGCGATACC GTGCCGGAGC GTACCGAGTA CAAACGCGCC
ATGCAGTTCA AGTCGCACGT GGCGGCGGTG CACAGCTACC CGGCCGGCAA CACCGTCGGC
TATGACCGCA CGTTTACCCT GACCCGTGAC TCGCGCCTGG CCAACATCAC GGTCGGGTAC
TCCGATGGCT ACCGCCGGGT GTTCACCAAC AAGGGCCATG TGCTGATCAA CGGCCACCGT
GTGCCGGTGG TGGGCAAGGT GTCGATGAAC ACGCTGATGG TGGATGTCAC CGACTTCCCG
GACGTGAAGG GTGGCAACGA AGTGGTGCTG TTCGGCAAAC AGGCCGGGGG CGAAATCACC
CAGGCCGAGA TGGAAGAAAT CAACGGCGCG CTGCTGGCCG ATCTGTACAC CGTGTGGGGC
AGTTCCAACC CGAAGATTCT CGTCGACTGA
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| Protein sequence | MPFRRTLLAA SLALLITGQA PLYAAPPLSM DNGTNALTVQ NSNAWVEVSA SALQHNIRTL
QAELAGKSKL CAVLKADAYG HGIGLVMPSI IAQGVPCVAV ASNEEARVVR ASGFTGQLVR
VRLASLSELE DALQYDMEEL VGSAEFARQV DAIAARHGKT LRIHMALNSS GMSRNGVEMG
SWSGRGEALQ ITDQKHLELV ALMTHFAVED KDDVRKGLAA FNEQTDWLIK HAKLDRSKLT
LHAANSFATL EVPEARLDMV RTGGALFGDT VPERTEYKRA MQFKSHVAAV HSYPAGNTVG
YDRTFTLTRD SRLANITVGY SDGYRRVFTN KGHVLINGHR VPVVGKVSMN TLMVDVTDFP
DVKGGNEVVL FGKQAGGEIT QAEMEEINGA LLADLYTVWG SSNPKILVD
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