Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2171 |
Symbol | |
ID | 5869960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2419646 |
End bp | 2420311 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641547296 |
Product | ABC transporter related |
Protein accession | YP_001668408 |
Protein GI | 167033177 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.675184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCA TCGAAAACCT TCACAAATCA TTCCCCACTC CCCAAGGCCC GCTCCCGGTT CTGCAGGGCG TCGATCTGCG CCTGGCACGC GGCAGCAGCC TGGCACTGAT GGGCGAGTCG GGCAGCGGCA AGAGCACCTT GCTGCACCTG GTGGCTGGCC TGGACCGGGC CGACAGCGGC CGCATCCTGA TCGACGACGT TGCGCTCGAC GGCCGTTCGG AAGCGTCTCT GGCACAGTGG CGGCGTGAGG GGATTGGCCT GGTGTTCCAG CAATACAACC TGATCAGCAG CCTGGACGTC GGCCTGAACC TGACCTTCCA GGCTCGCCTG GCCGGGCGGT ATGACCCGCA TTGGGCGGCT TACCTGGCGC AACGTCTGGG CCTGGCGGGC CTGCTTGCGC GTTACCCGGA ACACTTGTCG GGCGGCCAGC AGCAGCGGGT CGCCATCGGC CGCGCGCTGG CCGGGCGACC GGCATGGCTG CTAGCCGACG AACCCACCGG CAGCCTGGAT GAGGCCAGCA GCGACGAGGT GCTGAACCTG TTGCTGCAGT TGGTTGCCGA AGCCGGCAGC GGTGTGTTGA TGGTGACTCA CAGCCCACGG TTGGCGGCGC GTTTGCAGCA GCGCTGCTAC CTGCAGGCCG GCTGCGTGCG GCACGAGCAG GGCTGA
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Protein sequence | MLAIENLHKS FPTPQGPLPV LQGVDLRLAR GSSLALMGES GSGKSTLLHL VAGLDRADSG RILIDDVALD GRSEASLAQW RREGIGLVFQ QYNLISSLDV GLNLTFQARL AGRYDPHWAA YLAQRLGLAG LLARYPEHLS GGQQQRVAIG RALAGRPAWL LADEPTGSLD EASSDEVLNL LLQLVAEAGS GVLMVTHSPR LAARLQQRCY LQAGCVRHEQ G
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