| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2166 |
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| Symbol | |
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| ID | 5869955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2413874 |
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| End bp | 2415214 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547291 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668403 |
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| Protein GI | 167033172 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.156507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.972392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG ACCTCAAGCA ACGCCTGGAC AACGACCCGA TGGGCCGCTT CCAGTGCCTG
GCCATTGGTA TTTGCATCAT CCTCAACATG ATCGATGGCT TCGACGTGCT GGTCATGGCC
TTCACCGCCG CCTCGGTGTC CGCCGAGTGG GGCCTGAACG GCGCACAGGT AGGGCTGCTG
CTCAGCGCCG GCCTGTTCGG CATGGCGGCC GGGTCGTTGT TCATCGCGCC TTGGGCCGAC
CGGTTTGGTC GACGCCCACT GATCCTGTTG TGCCTGGCGC TTTCGGGCAT TGGCATGCTG
CTCTCGGCAC TGAGCCAAAC CCCGCTGCAA TTGGCGCTGT TGCGAGGCCT GACCGGGCTG
GGCATTGGCG GCATCCTGGC CAGTAGCAAC GTGATCGCCA GCGAGTACGC CAGCAAGCGC
TGGCGTGGCC TTGCGGTGAG CCTGCAGTCC ACCGGCTATG CCCTGGGCGC GACCCTGGGC
GGGTTGCTCG CGGTGTGGCT GTTGGGGCAT TGGGGCTGGC GCTCGGTGTT CCTGTTCGGC
GGCATCGTCA CCGTGCTGGT GATCCCGCTG GTATTGCTGT GGCTGCCGGA GTCGTTGGAC
TTCCTGCTGG CTCGCCGGCC AGCCAATGCC CTGGCCCGGG TCAACCGCCT GGCAGTGCGC
CTCGGTCAGC CGGCACTGGC GCAACTGCCG GCACTGGCGG CGAGGGCGCA GGGTACCACC
CGTGGTTTCA GGCAACTGCT GGCGCCGGAT ATGCGCCGCA CCACGTTGGT GATCTGGTTG
CTGTTCTTCC TGGTCATGTT CGGCTTCTAC TTCGTCATGA GTTGGACGCC GAAACTGCTG
GTGGCCGCTG GCCTGTCGGC CCAGCAGGGC ATCACCGGCG GTGTGCTGTT GAGTGTCGGC
GGCATCCTCG GTGCGGCGCT GATCGGCGGG CTGGCATCGC GTTGGCCACT GACGCGGGTA
CTGGCGTTGT TCATGCTCAT CACCGCCGTA CTGCTGGTGT TGTTCGTGGT CAATGGGGCC
TCGGTCACTG CTGCGCTGGC GCTGGGGTTG CTGATCGGGC TGTTTTCCAA CGGCTGCGTG
GCCGGCCTGT ATGCCTTGTC GCCAGTGGTC TATGACGCCT CGGTACGCGC CACCGGCGTG
GGCTGGGGCA TCGGTATTGG CCGCATGGGC GCGATCCTGT CGCCGACCGT GGCTGGCGTA
TTGCTCGATG GCGGCTGGCA ACCGCTGCAC CTGTACGGGG TGTTCGCCAG CGTGTTCGTG
CTGGCCGCAG GTTGCCTGTT GCTACTGCGG CCAATGGCCA AGCCAGCGGC CGCCCTCTCT
ACCGATGCAC TGAGCCACTG A
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| Protein sequence | MNTDLKQRLD NDPMGRFQCL AIGICIILNM IDGFDVLVMA FTAASVSAEW GLNGAQVGLL
LSAGLFGMAA GSLFIAPWAD RFGRRPLILL CLALSGIGML LSALSQTPLQ LALLRGLTGL
GIGGILASSN VIASEYASKR WRGLAVSLQS TGYALGATLG GLLAVWLLGH WGWRSVFLFG
GIVTVLVIPL VLLWLPESLD FLLARRPANA LARVNRLAVR LGQPALAQLP ALAARAQGTT
RGFRQLLAPD MRRTTLVIWL LFFLVMFGFY FVMSWTPKLL VAAGLSAQQG ITGGVLLSVG
GILGAALIGG LASRWPLTRV LALFMLITAV LLVLFVVNGA SVTAALALGL LIGLFSNGCV
AGLYALSPVV YDASVRATGV GWGIGIGRMG AILSPTVAGV LLDGGWQPLH LYGVFASVFV
LAAGCLLLLR PMAKPAAALS TDALSH
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