| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2129 |
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| Symbol | |
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| ID | 5869918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2378669 |
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| End bp | 2379343 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641547254 |
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| Product | alginate lyase 2 |
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| Protein accession | YP_001668366 |
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| Protein GI | 167033135 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000350709 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000589655 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGTAG ACATCAGCAA GCTCACCATT GCCACCCCGA TAGCGGTTTC CTCAACCAAT
CCGGTTGCCC TGGAAGTCAA CGGCGCCGAA GCAATTGCCC GCTTCCCGAG CATCGTGAAG
GTGCTCAGCG ATGGTTCGAT CCAGTTTTCA GCCCCCACCA AAGGGGCTTC GAGCAAAAGC
ACTCACAGGA CCCGCTGCGA GTGGACAGAA ACGGAAGACT GGACGCTGGC CAGCGCCCAG
GATCACTGGA ATCGCCAGAC AATGACGCTG ACCAAGGTAA ACGCGGCGCA GAAGGTGGTC
ATCGCCCAGA TGCACGTGCG TGGGGATGAC AGCCCGCCGG TGAAAGTGTT CTGGAACAAG
GGCAACATCA CCCTGGGCTT TCGACGCACC TACAACCAGA CAGACCCTGT GAACTCAACG
GTTTTGAAGG GGGTGCCGCT AGGGGAGAAG TTCAACATCA GCATCCACAC CACGGCTGAC
GGCGTGGTCA ATGTGACAGC CAAATGCAAT GGGGTATCCG GCACATCGGG CGATTTGCAG
CTCGACAGTA CCTGGGCTTC ACGCCTGTTC GAGTTCCACG GTGGGGTCTA CAACCAGGTC
GACTACACCG CTGCAACGCC CGCCGACGAA GGCTCGATCT GCATCATCAG CGAGCTCTCG
CTCATCCATC GCTGA
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| Protein sequence | MAVDISKLTI ATPIAVSSTN PVALEVNGAE AIARFPSIVK VLSDGSIQFS APTKGASSKS
THRTRCEWTE TEDWTLASAQ DHWNRQTMTL TKVNAAQKVV IAQMHVRGDD SPPVKVFWNK
GNITLGFRRT YNQTDPVNST VLKGVPLGEK FNISIHTTAD GVVNVTAKCN GVSGTSGDLQ
LDSTWASRLF EFHGGVYNQV DYTAATPADE GSICIISELS LIHR
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