Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2114 |
Symbol | |
ID | 5869903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2365982 |
End bp | 2366728 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641547239 |
Product | ABC transporter related |
Protein accession | YP_001668351 |
Protein GI | 167033120 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.745156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0880231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAG CCGCCAACCT GCTGGCAGCC TGCGGGCCAC GCATCGAGTT CGCCGGTATC GACCTGACGC TAGGCCGCAC CCGCATCCTC GAACAGGTCA GTTTCAGCGT TGCCGCTGGC AGCGTGCACG CCATCGTCGG CCCTAATGGC GGCGGCAAGA GCTCGCTGAT CAAGACCCTG CTGGGGCAGA TGCCGCATCA GGGGCAGCTG ACCCTGCATT GGCCGAACGA GCGCGAAGTG ATTGGCTATG TGCCGCAGGC ACTGGAGTTC GACCGTGGCC TGCCAATGAC CGTCGACGAC TTCATGGCCG CCATGTGTCA GCGTCGCCCG GCCTTCCTCG GCCTGTCGCG GCGCGTGCAG CCGGCTATCG ACGCGGCCCT GGCGCGGGTC GGCATGCTCG ACAAACGCAA GCGGCGTATG GGGGCGTTGT CAGGCGGCGA GCGCCAGCGC GTGCTGCTGG CCCAGGGCCT GATCCCCGAG CCGCAGTTGC TGGTGCTGGA CGAACCCATG TCAGCGCTCG ATGAAGCGGG TATCCAGGTG TTCGAACAAT TGCTGCTTGG CTGGCGCCAG GTTGGCACAA CCGTGCTGTG GATCGAGCAT GACCTGGAAG CTGTGCTGCG CCTGGCCGAC CGAGTGACGG GCCTGAACCG CCAGGTACTG TTCGACGCCC CACCCGCCCA GGCCCTGACC CCGGAGCGCC TGCTCGGCCT GTTCTCCGTT CACCCGCGTA GCGAGAGCCT TGCCTGA
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Protein sequence | MTVAANLLAA CGPRIEFAGI DLTLGRTRIL EQVSFSVAAG SVHAIVGPNG GGKSSLIKTL LGQMPHQGQL TLHWPNEREV IGYVPQALEF DRGLPMTVDD FMAAMCQRRP AFLGLSRRVQ PAIDAALARV GMLDKRKRRM GALSGGERQR VLLAQGLIPE PQLLVLDEPM SALDEAGIQV FEQLLLGWRQ VGTTVLWIEH DLEAVLRLAD RVTGLNRQVL FDAPPAQALT PERLLGLFSV HPRSESLA
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