| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2078 |
|---|
| Symbol | |
|---|
| ID | 5869867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2331057 |
|---|
| End bp | 2331506 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641547203 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668315 |
|---|
| Protein GI | 167033084 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5642] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCCG AAGTGCTTCG CGACAACGGT TACCATGAGT ACCGGGCGCG TTTGAACGCG
CTGCTGGAAA TCCCCGAGCT TGCCAGTGAC TTTGAAATCC ACACCCGCAT CACCCATGGT
TTTGCCGCCA CCTGGCTGGT AAAGCTGACC GAGCGTGGTG TGCTCACGCC GGTGGAGCGC
GACCAGATCA TTCCCCTGCG CACCCTGAAA ACCCGCATTG AGCGCGACCA GCCGTTGACC
GTGGATGAAA GCGACCGTCT GTTCCGCTCG GCCCACATCA CCGCCATGGC CGAAGCCGTG
TTCGGCGAGG CGGACAAGGC CAAACGTTGG TTGTCCAAGC CCAAGGAGCG CTTTTCGGGG
CTCACCCCGA TGCAGATGCT TACCACCCAG CAAGGCACCA CTCAGGTTGA AGAGATGCTG
CTGCAGATTG CCGAGGGCTT TGGCCTGTGA
|
|---|
| Protein sequence | MLAEVLRDNG YHEYRARLNA LLEIPELASD FEIHTRITHG FAATWLVKLT ERGVLTPVER
DQIIPLRTLK TRIERDQPLT VDESDRLFRS AHITAMAEAV FGEADKAKRW LSKPKERFSG
LTPMQMLTTQ QGTTQVEEML LQIAEGFGL
|
|---|
| |