| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2042 |
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| Symbol | |
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| ID | 5869831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2290854 |
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| End bp | 2292107 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641547167 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001668279 |
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| Protein GI | 167033048 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.367282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCATCC CCCGCAAGAT CGCCTTGCTC TGCCTGTTGC TGGCCGGTGC CACCAGCGCC
CAGGCCAGCC AGAGCCTGAG CCTGCCCCAG GCGCTTGCCG CCGCCTTTGC CCAGAACCCG
GAGCTGGCTG CGGCCGGCCG CGAAATCGGC ATTGCCGAAG GTGAACGGCG CCAGGCCGGG
TTGCTCCCCA ACCCCGAGCT GGCCTGGGAA GTCGAGGACA CCCGCCGTGA CACCAGCACC
ACCACCGTCA CCCTCAGCCA ACCGCTGGAG CTGGGCGGCA AGCGCGGGGC ACGTATCGCC
GTGGCCGGTG CTGGCCAGGC CATTGCCCAG CTCGACCTGG AGCGCCAGCG CAACGGCCTG
CGGGCCGATG TGGTGCAGGC CTTTCATGCA GCCTTGCGCG CGCAGACCGC GCTGGAGCTG
GCGCAGCAGT CGCAGGCACT GACTGAACGC GGGCTGCGGG TTGTGCAAGG GCGGGTCACT
GCGGGCCAGT CATCGCCGGT AGAGGCCACC CGTGCCCAGG TGCAGCTGGC CCAGGCCCAG
GCCGAAGTGC GCCGCGCACG CACCCAGCGC AGCGTGGCCT ACCAGGCGCT GGCCCGCCTG
ACCGGCAGCC CGCTGGCAGG TTTCGACCAG CTGCAGGCCG CCAACCTTTC GCCGGGCGTT
GCGCCCAACG CCGACGCTTT GCTTGAGCAG GTCGAACAGA CCGTCGAATG GCGCCTGGCC
GCTGCGCAGG TCGAGCGCGG CGATGCTTCC CTGGGTTCGG AAAAGGCCCA GCGTATTCCC
AACCTCACCG TCAGCCTTGG CAGCCAGTAC AGCCGTGAGG ACCGTGAGCG GGTGAACGTG
GTTGGCCTGT CCATGCCGTT GCCGTTGTTC GACCGCAACC AGGGCAATGT ACTGGCCGCT
GCGCGCCGTG CCGACCAGGC GCGTGACCTG CGCAACGCCG TGGAACTGCG CCTGCGCAGT
GAAACCCGCA GTGCCGTGAG CCAGTGGGCC ACGGCGATGC AGGACGTGCA GGCCTATGAC
CGCACCATCC TGCCCGCTGC GCAGCAGGCC GTGGATACCG CCACTCGCGG TTTTGAAATG
GGCAAGTTCG CCTTTCTCGA TGTACTCGAC GCCCAGCGCA CGCTGATCGA GGCCCGCGGG
CTGTACCTCG AGGCGCTGGC CTCGGCGACC GATGCGCGCG CGCAAGTCGA GCGGATCTAC
GGCGACCTCG ATGGCCTGAG CAACACACCG AATAGCAGGA GCAACAATGA CTAA
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| Protein sequence | MPIPRKIALL CLLLAGATSA QASQSLSLPQ ALAAAFAQNP ELAAAGREIG IAEGERRQAG
LLPNPELAWE VEDTRRDTST TTVTLSQPLE LGGKRGARIA VAGAGQAIAQ LDLERQRNGL
RADVVQAFHA ALRAQTALEL AQQSQALTER GLRVVQGRVT AGQSSPVEAT RAQVQLAQAQ
AEVRRARTQR SVAYQALARL TGSPLAGFDQ LQAANLSPGV APNADALLEQ VEQTVEWRLA
AAQVERGDAS LGSEKAQRIP NLTVSLGSQY SREDRERVNV VGLSMPLPLF DRNQGNVLAA
ARRADQARDL RNAVELRLRS ETRSAVSQWA TAMQDVQAYD RTILPAAQQA VDTATRGFEM
GKFAFLDVLD AQRTLIEARG LYLEALASAT DARAQVERIY GDLDGLSNTP NSRSNND
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