| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2029 |
|---|
| Symbol | |
|---|
| ID | 5869818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2275995 |
|---|
| End bp | 2276792 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641547154 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001668266 |
|---|
| Protein GI | 167033035 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG ACCTCGGCGG GCGCACCGCC ATCATCAGCG GCTCTACCGG CGGTATTGGT
CTGGCCATCG CCCGCGGCCT GGCCGGCGCC AACGCCGACG TGGTCATTGC CGGCCGCAGC
CAGAAATCGC TGGATGCAGC CTTGGCCGAA CTGCGCCAAC AAGGCGGCCG TGGGCAGATT
CACGGCGTGG TCGCCGACCT GGGCACCGCC ACCGGTGCCG ACACCCTGTT TGCCGCCCAC
CCACGGGCCG ACATCCTGGT CAACAACCTG GGCATCTACG ACGACGTCGA CTTCTTCGAC
GTGGCCGACA GTGAGTGGGC GCGCTTCTAC GATACCAACG TGTTGAGCGG CGTGCGCCTG
GCCCGCCACT ATGCACCGGG GATGGTCGAG AAAGGCTGGG GGCGGATCCT GTTCATTTCC
TCGGAATCGG GCATCGCCAT CCCTGCGGAC ATGATCAACT ACGGTGTTAC CAAGGCCGCC
AACTTGGCCG TTTCCCATGG CCTGGCCAAG CGCCTGGCCG GCACCGGGGT TACCGTGAAC
GCGATACTGC CCGGCCCGAC CCTCACCGAT GGCGTGGCCG CGCTGGTAGC CGATGCGGCA
CAGGCGTCCG GGCGCAGCAT TCGTGAAGAG GCCGACAACT TCGTACGTAC CGCACGGCCA
AGTTCGATCA TTCAGCGCGC CGCCGATGTC GACGAAGTCG CCCACCTCGC GGTGTACCTC
GCCTCGCCTT ACTCCTCCGC CACCACCGGC GCGGCCCTGC GGGTCGACGG CGGTGTGGTC
GACAGCCTTG CTATCTGA
|
|---|
| Protein sequence | MNIDLGGRTA IISGSTGGIG LAIARGLAGA NADVVIAGRS QKSLDAALAE LRQQGGRGQI
HGVVADLGTA TGADTLFAAH PRADILVNNL GIYDDVDFFD VADSEWARFY DTNVLSGVRL
ARHYAPGMVE KGWGRILFIS SESGIAIPAD MINYGVTKAA NLAVSHGLAK RLAGTGVTVN
AILPGPTLTD GVAALVADAA QASGRSIREE ADNFVRTARP SSIIQRAADV DEVAHLAVYL
ASPYSSATTG AALRVDGGVV DSLAI
|
|---|
| |