| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2026 |
|---|
| Symbol | |
|---|
| ID | 5869815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2273773 |
|---|
| End bp | 2274315 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641547151 |
|---|
| Product | transcriptional factor-related protein |
|---|
| Protein accession | YP_001668263 |
|---|
| Protein GI | 167033032 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.636879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCAGCC ACCCAACCCG CCACACTATT GCCCGCCAGT GGCAGTTGCT CAAGTTGCTG
CCCGGCCGCC ATCCGGGCAT GAGCTCTACC CAGTTGCAGG CCGCCCTGAC AACCGTGGGT
CATACCACCA GCAAACGTAC CGTCGAGCGC GACCTGGTCG AGCTCGCTGC GCTGTTCCCG
CTGCAGTGCA ACAGCAAAGG CATGCCCTAC GGTTGGTACT GGCAACCGAG CATGAGCCTG
GTCGATGCGC AGCCACTGCA ACCGGACATA CTGACACCCC CGGCACAGGT TGAACTGCAC
GCCTGGGTGG ACGACACACT GGCGCGCCTG CTGAAAGAAT CCCCGCTGTC CGCAGACATG
CAGCTGACCC CGCAAGCGAG CGGCGGCGCG GCATTGGTGG CCACCGTCGA CGACAACCGG
GCACTGATGG GCTGGCTGCT GTCGCAAGCG GGTTCGATCC GCGTGCAGGC CCCGAAGACG
CTGCGCGTGG CCATGCTGGA ACAGCTGCGC CAGAGCCTGG CGCTGCACGA TGGCGGTTGT
TGA
|
|---|
| Protein sequence | MPSHPTRHTI ARQWQLLKLL PGRHPGMSST QLQAALTTVG HTTSKRTVER DLVELAALFP
LQCNSKGMPY GWYWQPSMSL VDAQPLQPDI LTPPAQVELH AWVDDTLARL LKESPLSADM
QLTPQASGGA ALVATVDDNR ALMGWLLSQA GSIRVQAPKT LRVAMLEQLR QSLALHDGGC
|
|---|
| |