Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2006 |
Symbol | |
ID | 5869795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2256659 |
End bp | 2257141 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641547131 |
Product | DoxX family protein |
Protein accession | YP_001668243 |
Protein GI | 167033012 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.439778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCA TTACCCTGAC CACCTTCGAC CACATCGGCA GCTGGAGCGC CGACCTGCCG TTACGGCTGT TCCTGGCTTG GGAGTTTTTT GAATCCGGCT GGGAGAAGTT CAATGGCAGC AACTGGTTCG CCGACCTGCA AACCCGCTTC CCATTCCCCT TCAACCTGCT ACCAGTCGAG CTGAACTGGC AGCTGTCGAT GTGGGCGGAG CTGGTGCTGC CGTTGCTGCT GTTGTTGGGC CTGGGTACCC GGCTGGCTTC CTTTGGCTTG ATGGTCGTGA CCGTAGTAGC GATTGCGGCG GTGCATTGGC CGGCGCACTG GTCAGGTTTG GCTGAGCTGG CGCAGGGGTA TGCGATTACC GACCAGGGCT TTGGCAATTA CAAATTGCCG CTGATCTACT TGGTTGCATT GCTGCCTCTG CTGCTCAAGG GCGCCGGGCG CTTGAGCCTG GATCATTGGC TCAGGATGCG GTTCAGCAAG TAG
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Protein sequence | MKAITLTTFD HIGSWSADLP LRLFLAWEFF ESGWEKFNGS NWFADLQTRF PFPFNLLPVE LNWQLSMWAE LVLPLLLLLG LGTRLASFGL MVVTVVAIAA VHWPAHWSGL AELAQGYAIT DQGFGNYKLP LIYLVALLPL LLKGAGRLSL DHWLRMRFSK
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