Gene PputGB1_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2006 
Symbol 
ID5869795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2256659 
End bp2257141 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID641547131 
ProductDoxX family protein 
Protein accessionYP_001668243 
Protein GI167033012 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.439778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TTACCCTGAC CACCTTCGAC CACATCGGCA GCTGGAGCGC CGACCTGCCG 
TTACGGCTGT TCCTGGCTTG GGAGTTTTTT GAATCCGGCT GGGAGAAGTT CAATGGCAGC
AACTGGTTCG CCGACCTGCA AACCCGCTTC CCATTCCCCT TCAACCTGCT ACCAGTCGAG
CTGAACTGGC AGCTGTCGAT GTGGGCGGAG CTGGTGCTGC CGTTGCTGCT GTTGTTGGGC
CTGGGTACCC GGCTGGCTTC CTTTGGCTTG ATGGTCGTGA CCGTAGTAGC GATTGCGGCG
GTGCATTGGC CGGCGCACTG GTCAGGTTTG GCTGAGCTGG CGCAGGGGTA TGCGATTACC
GACCAGGGCT TTGGCAATTA CAAATTGCCG CTGATCTACT TGGTTGCATT GCTGCCTCTG
CTGCTCAAGG GCGCCGGGCG CTTGAGCCTG GATCATTGGC TCAGGATGCG GTTCAGCAAG
TAG
 
Protein sequence
MKAITLTTFD HIGSWSADLP LRLFLAWEFF ESGWEKFNGS NWFADLQTRF PFPFNLLPVE 
LNWQLSMWAE LVLPLLLLLG LGTRLASFGL MVVTVVAIAA VHWPAHWSGL AELAQGYAIT
DQGFGNYKLP LIYLVALLPL LLKGAGRLSL DHWLRMRFSK