| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1998 |
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| Symbol | |
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| ID | 5869788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2245441 |
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| End bp | 2246631 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547125 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668237 |
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| Protein GI | 167033006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.580365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAA CACCTTCCGC ATCGTTGCTG GCAACCAGTA ACGAACGCTT GCCGCTCAGC
GGGCTGCTGG CGCTGGCCAT GACCGGCTTC ATCGCCATCC TCAGCGAAAC CCTGCCGGCC
GGCCTGCTCG ACCAGATCGC CGAGGGTATG CACATCAGCC AGGCCATGGC CGGGCAATGG
GTGACGGCCT ATGCCCTGGG CTCGTTGCTG ACCGCCATTC CACTGGTGAC CTTGACCCAA
GGCTGGTATC GGCGCCGGGC GTTGTTGCTG GCGATCGTCG GTTTCGTACT GTTCAACGGG
CTGACGGCCG TGTCGAATTC CAACAGCCTG GCCTTGGTGC TGCGCTTTTT TACCGGCGCT
GCAGCCGGGC TGGCTTGGGG TTTGATCGCC GGTCACGCGC GGCGCATGGT GCCGGTGGCA
CAGCAGGGGC GGGCCATGGC TTTGGCCATG CTCGGCCAGC CGATTGCCCT GTCGCTTGGC
TTGCCGATTG CCACCTGGCT AGGTGCGGGG CTGGGCTGGC GCGCGACGTT CGTGGTGGTC
ACGCTGGTGG CGTTGCTGTT GGTGGTGTGG GTATTGCGGT CGGTGCCGGA CTACCCTGGG
CACACCGCCG GCAAGCGTCC AGCGGCCATG CAGGTGCTGC GCACACCGGG GGTGATGCTC
GTGCTGCTGG TGATCCTCAG CTGGATCCTT GGCCATAACA TTCTCTACAC CTATATCGTG
CCACTACTGG CGGCGGCTGG CATGGCGACG GACATTGGCC CTGTGTTGAT GGTGTTTGGC
CTGTCGGCCC TGGCCGGGAT TGGCCTGGTG GGGTTGCTGG TCGACCGGCA TCTGCGCACG
CTGGTGCTAT TGAGCCTGGC GGGTTTTGCC CTGGCTACGT TGGCTTTGGG GCAGGCGTCG
TCGTGGCTGA TGTACCTGAG CATCGCTTTG TGGGGCGTGA CCTACGGCGG TGCGCCGACT
CTGTTGCAGA CCGCTTGCGC CGATGCGGCG GGCGAAGGCG GGGATGTGGC GCAGTCGATG
CTGGTGACGG TGTGGAACAG CGCCATTGCC CTGGGCGGGA TCATTGGCGG CTTGCTGTTG
AGCGGCCCAG GAGTGGAAGG GTTTGGCGCG GTGGTACTGG GCCTGATCGC GCTGGCCTGG
CTGTTGAGCT GGGCCGGGCG GCGCAGCGGG TTTGTGCCAG GAAGGCGCTA A
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| Protein sequence | MSQTPSASLL ATSNERLPLS GLLALAMTGF IAILSETLPA GLLDQIAEGM HISQAMAGQW
VTAYALGSLL TAIPLVTLTQ GWYRRRALLL AIVGFVLFNG LTAVSNSNSL ALVLRFFTGA
AAGLAWGLIA GHARRMVPVA QQGRAMALAM LGQPIALSLG LPIATWLGAG LGWRATFVVV
TLVALLLVVW VLRSVPDYPG HTAGKRPAAM QVLRTPGVML VLLVILSWIL GHNILYTYIV
PLLAAAGMAT DIGPVLMVFG LSALAGIGLV GLLVDRHLRT LVLLSLAGFA LATLALGQAS
SWLMYLSIAL WGVTYGGAPT LLQTACADAA GEGGDVAQSM LVTVWNSAIA LGGIIGGLLL
SGPGVEGFGA VVLGLIALAW LLSWAGRRSG FVPGRR
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