| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1954 |
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| Symbol | |
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| ID | 5869744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2197289 |
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| End bp | 2199676 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547081 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001668193 |
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| Protein GI | 167032962 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.576685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0880633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAA CGCCGTTGAA ACTACTGATG GTCGAAGACA GCTCGATGGA TGCCGAGCTT
ACCCTGTTGC GCCTGGAACG CAGCGGGTTG CAAGTGCAAT CACAGCTGGT GTTCGACCAT
GCGGGCGTCG AACATGCCCT GCGCGAAGCC CACTACGACC TGATCCTGTG CGACTGTGTG
CTGCCAGGCT CGTCCGGCAC CGAGGTGCTG GCCATCGCCC AGCGCCTGGC ACCGGACATC
CCGTTCATCT TCCTGTCCGG TATTTACGGC GAAGAACACG CGGTGGAAAT GATCCGCCTG
GGCGCCACCG ACTATGTGCT GAAAAAAAAC CTGCCACTGC TGCCCAAGGC CGTGCGCAGG
GCGCTGACCG AAGTACAGGA GCGCCAGCGC CGGCGCCGCG CCGAAGAAGC ATTGGCCGAC
GTTGAGGCGC GTGCTTGGAT CGCCATCGAC GCTGCCGGCA TGGGCACTTG GGACCTGCGC
CCGCAGGAAG GCCTGCTGGT TTGGGATGAC CGCTGCAAGA CGTTGTTCGG CCTGCCTACC
AGCACCGAAA TGAGCCTTGA GGTGTTCCTC GGTGGCATCT ACCCCGATGA CCTGGCAATG
GTGCGTGACG CGGTGGAATA TGCCATGCGC CCCGAAAGCG GTGGCCAGTA CCGGGTGGAG
TTTCGTATCG CGCCAGTCGA TGGCCAGGAG CCGCGCTGGT TGCTCAGCAG TGGCCAGAGC
CAGTTCGTCG ACGGCCAATG CGTGCGTTTT TCCGGTGTGC TGCAGGACAT CCACACGCAA
CGCCTGGCCA CCCAGGCACT GCGCCAGCTG AACGAGATGC TCGGTGAACG GGTCGAGCGA
CGCACGCGCG AACGCGATCG CGCCTGGGAG CTGTCGCAAG ACTTGCTGGC CGTACTGAAC
AAGGACCTGA CCCCGGTCGC GCTGAACCCC GCGTGGGAGG CCAGCCTGGG TTTCTCCCGC
GAGCGCCTGA GCCAGTCGTC CCTGCTGCAC CTGCTGCCCG AGCCCGATCA GGAACTGCTA
CTCACCGAAC TGGCCGCCCT CGCCCATGGC CGCACCAGCG CCCGCTTTGT CGGCCGCATC
CTGCATGCCG GCGGCCAGCA GCGCTGGCTG TCGTGGGTGG TGGTGCCGGA AGACACCCTG
CTGTACGTGG TGGCACGCGA CATCACCAGC GAACGTGAAG CCGCCCTGGG CCTGGCTGAA
GCCAACGCCC GCCTGCGCGA GCAGATCAAC GAACGCGAGC GCATCGAGGC TGCCTTGCAA
CAGATGCAGA GGCTGGAGGC GGTTGGCCAA CTGACCGCAG GCGTGGCCCA TGACTTCAAC
AACTTGCTCA CGGTGATCCT CACCGGTGCA AGCTTTCTTG AGCGTGACCT GGCCAAGGCC
GACTTGGACA AGGCCCGCAC ACGCCTCACG CATATCCGCG AAGCGGGCGA GCGTGGCGCC
AAGCTGACCT CGCAGTTGCT GGCTTTCTCC CGTCGCCAGC GTCTGGAGCC GGTAGCGCTT
AACCTCAACC GCACCTTGGC CGGCCTGGAA GAGCTGCTGC GCCGTACCCT GGGTGGCAAC
GTCTCGGTGC GCCTGGACCT GGACCAGGCC CTGTGGCAGG CAATGACCGA CCCGACCCAG
ACCGAGATGA TCATCCTCAA CCTGGCGATC AATGCCCGCG ATGCCATGCC CGAGGGCGGA
CAGCTGACCC TTACCACCCG CAACACCCGT ATCAACGGGC GCCCGCATCG CCCAGAAGAC
CCGGACCCCG GCGAGTACGT GATGCTGAGC ATCCGCGATA CCGGCTGCGG CATGAGCGAC
GACGTGTTGG CCAAGGTGTT CGAGCCGTTC TTCACCACCA AGGACATCGG CAAAGGTTCG
GGCCTGGGCC TGGCCCAGGT GTTCGGCTTC GCCAAGCAGT CCGGGGGTGG CGTGCGCATC
GATACCACAC CGGGGCGCGG CACCGAGGTG GCGGTGTACC TGCCCGCAGT AAAGGAGGAA
GTGGTGGACG AACCTGCCGC AGCGGTGCTC AGCCAGTCGA GCAGCGAGAG CGGCCGTAAC
CGCACGGTGC TGCTGGTGGA CGATGACCAC CTGGTGCGCG ACATGCTTGG CGATGTATTG
CGCCAGTACG GCTATCAGGT GCGCCAGGCG CACAGCGGCG AGCAAGCATT GGCATTGCTG
GATGACGAGA TCGACCTGCT GCTGACGGAT TTCGCCATGC CCGAGTTCAA CGGTGCGCAA
CTGGCGCTGG CGGCGCGTGA GCGGTACCCG CGCCTGCCCG TGGTGTTCCT TACTGGGTAT
GCCGAGCTGC AGGGGCTGGA GCTGCCGGGC AGCCTGGTGA TTCAGAAGCC GGTGCAGGCC
GATGAGCTGG CCAGGGTACT GAACGAAATG CTGGGCATTG CCGGGTAA
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| Protein sequence | MQQTPLKLLM VEDSSMDAEL TLLRLERSGL QVQSQLVFDH AGVEHALREA HYDLILCDCV
LPGSSGTEVL AIAQRLAPDI PFIFLSGIYG EEHAVEMIRL GATDYVLKKN LPLLPKAVRR
ALTEVQERQR RRRAEEALAD VEARAWIAID AAGMGTWDLR PQEGLLVWDD RCKTLFGLPT
STEMSLEVFL GGIYPDDLAM VRDAVEYAMR PESGGQYRVE FRIAPVDGQE PRWLLSSGQS
QFVDGQCVRF SGVLQDIHTQ RLATQALRQL NEMLGERVER RTRERDRAWE LSQDLLAVLN
KDLTPVALNP AWEASLGFSR ERLSQSSLLH LLPEPDQELL LTELAALAHG RTSARFVGRI
LHAGGQQRWL SWVVVPEDTL LYVVARDITS EREAALGLAE ANARLREQIN ERERIEAALQ
QMQRLEAVGQ LTAGVAHDFN NLLTVILTGA SFLERDLAKA DLDKARTRLT HIREAGERGA
KLTSQLLAFS RRQRLEPVAL NLNRTLAGLE ELLRRTLGGN VSVRLDLDQA LWQAMTDPTQ
TEMIILNLAI NARDAMPEGG QLTLTTRNTR INGRPHRPED PDPGEYVMLS IRDTGCGMSD
DVLAKVFEPF FTTKDIGKGS GLGLAQVFGF AKQSGGGVRI DTTPGRGTEV AVYLPAVKEE
VVDEPAAAVL SQSSSESGRN RTVLLVDDDH LVRDMLGDVL RQYGYQVRQA HSGEQALALL
DDEIDLLLTD FAMPEFNGAQ LALAARERYP RLPVVFLTGY AELQGLELPG SLVIQKPVQA
DELARVLNEM LGIAG
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