Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1941 |
Symbol | |
ID | 5869730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2185135 |
End bp | 2185650 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641547067 |
Product | hypothetical protein |
Protein accession | YP_001668180 |
Protein GI | 167032949 |
COG category | [R] General function prediction only |
COG ID | [COG3313] Predicted Fe-S protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00337629 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCCTGT GTTCCACCGC CAAGCTGTTG TTTTTCATGT CCAACAAGTC CATCAAAACC CCTTGCGTCG GCCTGTGCTC CACGGTGTAC GGAGACACGG TGTGCCGTGG CTGCAAGCGT TTTCACCACG AAGTGATCAA CTGGAACGGT TACGACGACA CGCAGAAGCG CGCCGTGTGG TTGCGCCTTG AGCAACTGCT GGTGCAGGTG ATGATGGCCA AGCTTGAGGT GTTCGACAAA AGCCTGCTGC GCCAGCAACT GGAGCAGCGC TCGATCCGCT TTGTCGAGCA GCAGTCGGAA TATTGCTGGG CTTACCAGCT TATCGCCCGC GGGGCGCGGA TGATCCGTGA CCTGGAGGCC TACGGTATGG TGCTGTTGCC GGAATTTCGC GACTGGGAAC TGCCGCAGTT GCGCGATGCC ATCGATCGCG AGTTTTTCCT GCTTTCAGAG GCGCATTATC AGCGCTACAT CGCCCCCAGC TTCCTGCGCG ATGCCTTGGC GACGGGGCAA GGTTGA
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Protein sequence | MGLCSTAKLL FFMSNKSIKT PCVGLCSTVY GDTVCRGCKR FHHEVINWNG YDDTQKRAVW LRLEQLLVQV MMAKLEVFDK SLLRQQLEQR SIRFVEQQSE YCWAYQLIAR GARMIRDLEA YGMVLLPEFR DWELPQLRDA IDREFFLLSE AHYQRYIAPS FLRDALATGQ G
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