| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1907 |
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| Symbol | |
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| ID | 5869696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2148344 |
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| End bp | 2149384 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641547033 |
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| Product | patatin |
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| Protein accession | YP_001668146 |
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| Protein GI | 167032915 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.331125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000758802 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAC GCGTAGCGCT GGTACTGGGA TCGGGCGGAG CCCGGGGGTA TGCACACATC
GGCGTCATCG AGGAAATCGA GCGCCGCGGC TACGACATCG CCTGTATCGC CGGCTGCTCC
ATGGGCGCGG TGATTGGCGG CATCTACTCC GCCGGCAAAT TGGACGACTA CCGCAACTGG
ATCGAAAGCC TGGATTATCT GGATGTATTG CGCCTAGTCG ACGTCAGCTT TCGACTGGGT
GCCATTCGCG GCGACAAGGT GTTTGGGCAG ATCCGCAAGA TCGTCGGCGA AATCAACATC
GAGCAACTGC GTATTCCTTA CACAGCAGTG GCCACCGACC TCACCAACCA GCAGGAAATC
TGGTTCCAGG AGGGCTGCCT GCATCAGGCC ATGCGCGCCT CGGCAGCCAT CCCCAGCCTG
TTCACACCGG TGATGCAAGG CAACCGCATG CTGGTCGACG GAGGCATCCT CAACCCCTTG
CCAATCGTCC CGGTGGTGTC CAGCCATTGC GACCTGATCA TCGCGGTCAA CCTCAACGCC
ACCAACCAGA AGCACTATCA GTTGCCGGTG ATCGAACGCC CGGCGGCATT CAAGATGCGT
TTTGATGCTT TGTTGAGTTC ACTGGGTTCA CGCTTGCCGT TTCGGCGCAA GCCGGCCGAG
GAGCTGATAC GCATCGAGCA GGAGATCGTC GCCGAAGGGC TGGCTCCACC CAGCCCATGG
CTGAACGATG CCGCCGACCC GGAAAGCCAG CAACCGGCGG CGGCACCGGA GCGCGAGGGT
GCACCGAAGT CGGCTACCGG TTCGTTCATC ATCGATAACG TGGGGCCTGC TTCGCTGCTG
GACCTGATCA ACCAGAGCTT CGAGGTCATG CAGACCTCGT TGGCACAGTA CAAAATCGCC
GGCTATCCGC CGGACGTGCT GATCAACGTG CCTAAACGGG TCTGCCGGTT TTTCGAGTTC
TACAAGGCGC CGGAGCTGAT TGCTCTAGGG CGGGAGATTG CGCGGGATAC GCTGGATAAC
TATGAAGGGG TGAAGCGCTA A
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| Protein sequence | MSKRVALVLG SGGARGYAHI GVIEEIERRG YDIACIAGCS MGAVIGGIYS AGKLDDYRNW
IESLDYLDVL RLVDVSFRLG AIRGDKVFGQ IRKIVGEINI EQLRIPYTAV ATDLTNQQEI
WFQEGCLHQA MRASAAIPSL FTPVMQGNRM LVDGGILNPL PIVPVVSSHC DLIIAVNLNA
TNQKHYQLPV IERPAAFKMR FDALLSSLGS RLPFRRKPAE ELIRIEQEIV AEGLAPPSPW
LNDAADPESQ QPAAAPEREG APKSATGSFI IDNVGPASLL DLINQSFEVM QTSLAQYKIA
GYPPDVLINV PKRVCRFFEF YKAPELIALG REIARDTLDN YEGVKR
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