| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1886 |
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| Symbol | |
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| ID | 5869671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2122249 |
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| End bp | 2123562 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547008 |
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| Product | C4-dicarboxylate transporter DctA |
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| Protein accession | YP_001668125 |
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| Protein GI | 167032894 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.327512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAT GGTGCTCGCG TTCGATTTTC CTGCAAGTCG TACTCGGCCT TGCCCTCGGC
ATCGCCTGCG GTCTGAGCTT CCCCGACCTC TCCCTGCAAC TCAAACCTCT TGGCGACGGC
TTCATCAAGC TGATCAAGAT GCTCATCGGC CTGATCGTGT TCTGCGTGGT GGTCAGCGGC
ATCTCAGGAG CGGGCGACCT GAAAAAGGTC GGGCGCATCG GCCTGAAATC GGTGATCTAC
TTCGAAGTGC TGACCACCCT GGCGCTGGTG ATCGGCCTGG TGTTCGCCTT CAGCAGTGGC
ATTGGTAGCG GTGCCAACAT TCACCTGGAC CAGCTGTCCA CCGCTGATGC CAACGGCTTG
GCCGAGCGCG GCCAGCACAT TCACGGCGCC ACGGCGTTCT TCATGGACCT GATCCCCACT
TCGGTGATCG GCGCCTTCGC CGACAACAAC ATTCTCCAGG TGCTGTTGTT CTCGGTACTG
TTCGGCAGCG CGCTGAACCT GGTGGGTGAC TCGGCCGCCG GCATTTCGCG GCTGATCAAC
GAACTGAGCC ATGTAATCTT CCGCATCATG GGCATGATCG TGCGCCTGGC GCCGATCGGC
GTGTTCGGCG CCATTGCCTT CACCACCAGC AAATACGGCC TGGAATCGCT GCAGCACCTG
GGCGGCCTGG TCGCGCTGTT CTACCTGACC TGCGCCGGCT TCGTACTGAT CGTGCTGGGC
ACCGTCATGC GCCTGTCGGG CCTCAAACTG CTGCCGTTGA TCAAGTACCT GCGTGAGGAG
CTGACCATCG TTCTCGGCAC CGCTTCTTCC GACGCCGTAC TGCCACAAAT CATGCGCAAG
CTGGAGCACC TAGGCATTGG CAGTTCCACG GTCGGCCTGG TGATTCCGAC CGGCTACTCG
TTCAACCTCG ATGGTTTCTC CATCTACCTG ACCCTGGCCA TCGTGTTCAT CGCCAACGCC
ACCGGCACAC CGCTGGAAAT GACCGACCTG CTGACCATCC TGCTGGTGTC GCTGGTGACT
TCCAAAGGCG CTCACGGCAT CCCAGGCTCG GCGCTGGTGA TTCTCGCTGC CACCCTGACC
GCCGTACCGG CCATTCCGGT GGTCGGGCTG GTATTGGTAC TGGCGGTGGA CTGGTTCATG
GGTATTGGCC GGGCGCTGAC CAACCTGATC GGCAACTGCG TGGCTACCGT GGCCATCGCC
CGCTGGGAAA AAGACATTGA CCTGGAACGC GCGCAGAACG TGCTCGATGG CAAACTTGGT
TTTAACCCCA CGCAGCGCAA ACAGCCCAAC ACACACCATC AACAGGAATT TTGA
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| Protein sequence | MLKWCSRSIF LQVVLGLALG IACGLSFPDL SLQLKPLGDG FIKLIKMLIG LIVFCVVVSG
ISGAGDLKKV GRIGLKSVIY FEVLTTLALV IGLVFAFSSG IGSGANIHLD QLSTADANGL
AERGQHIHGA TAFFMDLIPT SVIGAFADNN ILQVLLFSVL FGSALNLVGD SAAGISRLIN
ELSHVIFRIM GMIVRLAPIG VFGAIAFTTS KYGLESLQHL GGLVALFYLT CAGFVLIVLG
TVMRLSGLKL LPLIKYLREE LTIVLGTASS DAVLPQIMRK LEHLGIGSST VGLVIPTGYS
FNLDGFSIYL TLAIVFIANA TGTPLEMTDL LTILLVSLVT SKGAHGIPGS ALVILAATLT
AVPAIPVVGL VLVLAVDWFM GIGRALTNLI GNCVATVAIA RWEKDIDLER AQNVLDGKLG
FNPTQRKQPN THHQQEF
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