| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1838 |
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| Symbol | |
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| ID | 5869618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2064707 |
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| End bp | 2069233 |
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| Gene Length | 4527 bp |
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| Protein Length | 1508 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546955 |
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| Product | hypothetical protein |
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| Protein accession | YP_001668077 |
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| Protein GI | 167032846 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.593101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.142842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCT CATTCTTCGC TCCCGGGATT GCCATGATTT CCAGCACCTC CAACCTTGAA
ACCAGCCATC AGAAAGCAAC TGATGATTTC ATTGCCGCCA GGCTACCTGA CTGGTTGAAA
CGGGCCAGCC AGGCCCAGAT CATCGCCCTG CGCACCAGCC TCAACACACA TCAGGCCAGC
CAGGCCCGTT TGCGTGGGCT CACGCAGACC CTGCAACCCC TGCAGGTGTT CGCCCAACAG
CATCTGCAGG GTGTGCTGGT GAAGCCACTG CCAGTAGGCA TGACCCTCGC AGGGCTGGAA
TGGCTGCAGG TTTCACCGCG CATCGGTACC TTCCCCGGTA CGCTTCAGCA GACCTATCAC
TACTCGGCCA CCCGCCGGGA TGGTTTGCTG AGGCTGATGG GTAATTTCGG CCCTGACGAA
TCGTTTTTCC TGGGCACCGG GCTGGTTCTC CCGGGGCGAG ATGACTTGCT GACCGGCACG
CCCGAGCAAT TGGTTGCAGC ATGCCGTGCG CTGGATGTGG GTCGGCTTTA CCAGGACGAG
CTGGCGCGGA CGTTCAATGC CACCACCGAG GGCATCCTTG CCCAGGACAA ACGTTCGGGC
CTGGCATTGG CTGCGCAAGT CGCGATGCTC AAGGGTGACA TCGACGAGCA GGTACAGCAT
GCCTTGCTGC AGGTGGTGGA GGGCGGTGGC CCCCATTCTG ACACAGGCCT GCATGGTTAC
CCTGGCCTGC TGGAGGTGTT GGGCCAACGT GTGGCTGACG GGCTGTTCAT TCGCCTGCGA
GACTCTGTTG GCCAGGACCG AGGGGTGGTG CTCTACCTGC CCAGTGATCC CGTGCAGGCG
CTGCGCCGTT TCGATTCCAC AGAGGCCATG AACGCTGCAA TGGCTGCAAC GTTGCAAGAG
AAGGGCTACC GAGACTACTT CACCCAGCTC ATCAGCTTGC GACAGCGGGC GAGCTTCGCT
GGTCTGCTGA GTGCGCGCCT CTCGGATCCA CAGCCCGACC TGGCGTTGAG GGGCCCTACA
GCCTTCGGGG ACCTGTTCGC TGCGCTGGCT GCGCAACAGG TGCAGCGAGT CAAGGACGAT
GCTCGCCTGT TGCTGGTACC CACCGCGGAC GCCGATGCTG CAGCGGCCCG TGCGCGTCGG
GCTGCCTGGC GTGCCGCGGG CCTCGATCTG CTCAACCTGG CGGGGCTTTT CATCCCTGTC
GTAGGGGCGA TATTGCTTGG TCAGCTGGTG GTGCAGACGC TTGGCGAGGT TTTCGAGGGC
GTCAGGGATT GGGCCCGTGG GCACCAGCAC GAAGCCCTGG AGCATATGCT GGGTGTAGCT
GAAACGGTGG CTGCGACGGC GTTGACCGTG GCGGGTGTGA GCGTTCTGCG CAGCGCCTTC
GTCGATGGCC TGCAGCCTGT GAGCGTGGGC GGGCGGCGTG GCCTGTTGGG TTCCGATGAC
ATTACGGCCT ATGAGTCGAC CCCAGGCACC ATCGCCCTAC GTGACGATGG GCTCTACGGC
GACGAGAGCA GGCGCTGGAT GCGCAGGGGC CAGCGTTACT ATGAGGTACA GCGCAGCGAG
CCTGAAGCCC CTTACCGCTT GTGTCACCCC AGTGGCGAAA AGGCGTATGG GCCGGCCGTG
CTGCACAACG GCGAGCGTAG TTGGCGCCTG ATGCAGGACC AGCCGCAGCG CTGGAGCGAC
GTGGCCATGA TGCTCGATAC CCTGTGGCCG CAGCATCCTT CCATTGACGC ACAGCGGGCT
GCGCAGGTGC TGCGGGTAGC CGGTGTGGAT GCCGAGGAGT TGCGGGGCGT GCTGGTGGAA
AACCGACCGG CGCCTGTCAA CTTGCGAGAG ACCTTGCGGC GCTTCGAAGC CCATGCCCGT
ATCGAGGCGT TTTTCACTCG TCTGGCCAGC TACTCGCTTG TCACCCAAGA CAGTGCATTG
CTCGCCTGGT GTGAGGCTCG TGCTGGCAGC ACCAACAGCG ACGTCCTGCT GCGCCAGCAA
GCTGCCCTGT GGGGGCCTCT TCTCGACCAC CTGAGCAGTT CGCCAGCTGG CGATGACGCT
CTGCTGACGT TGATAAGGCG GGACTTTGCC GGTTTGCCGG AAGCTTATGC GCAGTCGCTG
GCGGCGCAGT TCAGCGAAGG CGAGCGGTTC CTGGCAATGT CAGGTGGGCG TGTGACGCTG
AATTTAGCAA GCAAGGCCCG CGCGCTGCTG CGTCTGGCCA GATTGAACCG TGCACTCGAA
GGGCTTTACC TGCCCGGCAG CTACTGCAAC GAAACCGGCG AACTGGCTTT CGCGCTGCTT
CAGAAGGAAG TGGAAAGCAG CAACGGTGTG TCTGCCAATG CCCTTGACCT GCAATTGCGT
GAAAGCGCAC CGGACGGGCA TTTGCTCAAG GCCGTGGGCC CCGCTGGCGT CCCCCGGATG
CGTCGGGTAG TGGTGCGCAA AGACGGGCGC TTCCATCTCT ATGATGGCTT GGGCCGTGCG
TTGCCGTTCG GCGCTGGTGA TTCGGCAAAC CTGTACGACA TGCTTGCCGC GGCCTTGGCA
CCTGAGCACC GCACGGCGCT TGGCATGGCT GAAAACGATA TGGGAACGCA GCTACGTCAG
AGACTGCTGG CACGACTTCC CGCTACGCAC CAGGAGGTTG TCGAACTGTT GCAATGGCCA
ACCCAGGTGC AGTGGTTCAA CCCTGGGCGA CGCTTGGCTG ATGGCCGGGT TGGCTATCTG
CTCAGTGGCC GTGGTACGGG CGACAGCCAC TCACTGCCGG CACGTGTTCG TGAGCGCTTG
CGCCAGCTTT ATCCAGGGCT GGATGAGGCA CAGCTGGATC AGGAACAGGC ACTGCTGATG
AATAGGCAGC AATCCGCCTA TGAGCGCATC GTAGAGCTTG AAGACGACCA AGATCAGTTG
AGCCGCCACC TCAACCGCTG GGTCAGCGCA GAGCTGAGCG AAAGGCGCCA GCGGCTGCGC
CAGCGATCAG CCGACGCTAT TCTGCGTGCC TGGCGCTTGC AGGGCGACTG TATTTACGAC
CATGCAGGCA TGGTGACCGG CCAGCGTCTG TCGCTGAGTG GCGTGCAGCT CAGCAGTTTG
CCGGAGTTAC CGGCGGCCAT CGATTTCCAC CGTATTACCA GCCTGCGCTT GCAGGAGTCG
GCGGTTGATA GGGTGCCAGT GAGTTTCTTG TGCCCGTTTA CCGCGCTGAC CGAGTTGGAC
ATGAGCCTCA ACCAACTGCG CAACATTCCG CTCGGGATTG CTTATCTGCC GCAATTGCAG
CGTTTGCGCC TGGCACATAA CCAGATCCGC CTCAATGCCC AAGCAGTCGG TATTCTGCAG
GCTCTGCCTG GCTTGTTGCA TCTAGACTTG AGCTACAACC GTCTGGAAGA CCTCGACCTA
CGCTTCAACC ATCTCTCGGC CCTGACTCAC CTGAACCTGC GCCACTGCCG GCTGGGGGCC
TGGCCCAGCC GCATCGAACT GTGCGGCCTG CTGGTGCACT GTGATCTGCG CGACAACCAA
TTGCCGACGC CACCGGAAGC GGTGATTGCA ATGCCCTATG CCTGGCGCCG GGGGCTTATC
GTTGATCGCA ACCCACTGAG GGGGGTTCAA CTGCAACGCT TGTACGCGCT GGATCCCATT
GAGGAGCATG GGCATCTGCC AGAGTCGATG GGCAAGGTCG ACTTGCCTCA TGCGCGCAGC
CTGTGGCTGC AGCATATTGC CGAAAACGAC CGCGCTGCGC GCGCAGTGCT ATGGGACGGT
CTGCTGGCCG AACCAGACAG TGCGGGTTTT TTTCGTATCC TGGCGTGGTT GGAGCATACC
GCTGATTATG CTTCAGCAGT TGCCGGGGGC GGTCGGGAAG TACTTGTGCG TGATGTGTGG
GCCATGCTGC AGGCGATGGA CGTCAGCCCA GCGCTGCGGT TGCGCGTTTT TGAAGCGGCC
AATCAACCGG TTTCCTGCTC GGACATGGTC AGCGATCGCT TCAGCCACAT GAATGTACAG
GTCTTGTTGG CCAAGGCTGA AGCGGACGCA CAAGACCTGA CGCAACGGGC GCAGCTCATG
GCGTTCGGTC GGCAGCTGTA CCGTCTTGAC CAGGTGCAGC AGCAGGCCCG CCAGGCGATC
CTGCGCCAGG GTGTCGAAGG TGAGCAGGTG GGGCGCTCTG CCTGGTCACT GGCATACCGT
GTGCGCTTGC GCGAGCGTCT TGATTTGCCT GGTCAGCCAT GGGCGATGCG TTACCCGAAC
GCTGTCGCGC TGAGCGATCA ACACATCAAC GATGTGGCTG CGGCTGTCCT CGCCAACGAG
ACGATCGAGG CGCGCACTCA AAGCCTGGTG AGTCAAGCGT TCTGGGAGAC TTTTCTTGGT
GAGCAGCACC GGAACTTGTT CGAGTCGCTC AGAACCGACT ATCTCCAGCG CAGGGCGAAC
CTGCGCGCTA TCCAGCCACC GCTCTCGGCT GAGCAGCTTC GTTCGCAGGT CGCGGATCTG
GAGGATCAGG AGCAACGCGA TAGAGAACGA TTGCAGGCAG GCCTGACCGA GTCCTACTTG
CGTGGCGAGA GTCGGGGCGA CGGCTGA
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| Protein sequence | MPASFFAPGI AMISSTSNLE TSHQKATDDF IAARLPDWLK RASQAQIIAL RTSLNTHQAS
QARLRGLTQT LQPLQVFAQQ HLQGVLVKPL PVGMTLAGLE WLQVSPRIGT FPGTLQQTYH
YSATRRDGLL RLMGNFGPDE SFFLGTGLVL PGRDDLLTGT PEQLVAACRA LDVGRLYQDE
LARTFNATTE GILAQDKRSG LALAAQVAML KGDIDEQVQH ALLQVVEGGG PHSDTGLHGY
PGLLEVLGQR VADGLFIRLR DSVGQDRGVV LYLPSDPVQA LRRFDSTEAM NAAMAATLQE
KGYRDYFTQL ISLRQRASFA GLLSARLSDP QPDLALRGPT AFGDLFAALA AQQVQRVKDD
ARLLLVPTAD ADAAAARARR AAWRAAGLDL LNLAGLFIPV VGAILLGQLV VQTLGEVFEG
VRDWARGHQH EALEHMLGVA ETVAATALTV AGVSVLRSAF VDGLQPVSVG GRRGLLGSDD
ITAYESTPGT IALRDDGLYG DESRRWMRRG QRYYEVQRSE PEAPYRLCHP SGEKAYGPAV
LHNGERSWRL MQDQPQRWSD VAMMLDTLWP QHPSIDAQRA AQVLRVAGVD AEELRGVLVE
NRPAPVNLRE TLRRFEAHAR IEAFFTRLAS YSLVTQDSAL LAWCEARAGS TNSDVLLRQQ
AALWGPLLDH LSSSPAGDDA LLTLIRRDFA GLPEAYAQSL AAQFSEGERF LAMSGGRVTL
NLASKARALL RLARLNRALE GLYLPGSYCN ETGELAFALL QKEVESSNGV SANALDLQLR
ESAPDGHLLK AVGPAGVPRM RRVVVRKDGR FHLYDGLGRA LPFGAGDSAN LYDMLAAALA
PEHRTALGMA ENDMGTQLRQ RLLARLPATH QEVVELLQWP TQVQWFNPGR RLADGRVGYL
LSGRGTGDSH SLPARVRERL RQLYPGLDEA QLDQEQALLM NRQQSAYERI VELEDDQDQL
SRHLNRWVSA ELSERRQRLR QRSADAILRA WRLQGDCIYD HAGMVTGQRL SLSGVQLSSL
PELPAAIDFH RITSLRLQES AVDRVPVSFL CPFTALTELD MSLNQLRNIP LGIAYLPQLQ
RLRLAHNQIR LNAQAVGILQ ALPGLLHLDL SYNRLEDLDL RFNHLSALTH LNLRHCRLGA
WPSRIELCGL LVHCDLRDNQ LPTPPEAVIA MPYAWRRGLI VDRNPLRGVQ LQRLYALDPI
EEHGHLPESM GKVDLPHARS LWLQHIAEND RAARAVLWDG LLAEPDSAGF FRILAWLEHT
ADYASAVAGG GREVLVRDVW AMLQAMDVSP ALRLRVFEAA NQPVSCSDMV SDRFSHMNVQ
VLLAKAEADA QDLTQRAQLM AFGRQLYRLD QVQQQARQAI LRQGVEGEQV GRSAWSLAYR
VRLRERLDLP GQPWAMRYPN AVALSDQHIN DVAAAVLANE TIEARTQSLV SQAFWETFLG
EQHRNLFESL RTDYLQRRAN LRAIQPPLSA EQLRSQVADL EDQEQRDRER LQAGLTESYL
RGESRGDG
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