| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1837 |
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| Symbol | |
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| ID | 5869617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2060153 |
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| End bp | 2064637 |
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| Gene Length | 4485 bp |
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| Protein Length | 1494 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546954 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_001668076 |
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| Protein GI | 167032845 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.555713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA CTCAAGTCAA TCCCAAAGAA CAGAATGCCG ATAGGGAGTT CATTGCCGAG
CAACTGCCCG CTTGGCTGAG CAATGCCACG CCACGGCAAC TCAATACACT GCGCAGCAAG
GTGGCAGCGC ACCATGCGAG CCAGCGCCGC GTGGCTGCCG TGACGCGGCA ACTCCAGCCT
TTGCACACGT TCGCCAAGCA GCAGCTCGAA CAGGCCATGC AGGCCCGGAT GGGGTTGACG
CTCGACCTTG ACCAGGCGAC TTGGCGAGAA GAGCGCAGGC GCTTGAAAAT CGTGCAAGGG
ACGGTGCGGG AGTTCACCTC TTACTTCGTC AGGGTACCTG CGCTGCAAAA AATGATGCAG
AACTTCAAGG AGGCTGAATC GTTCTTCTCC GACACTGCGC TGGTGCAGGC CGCCCAACAG
GGGGCTAGCG GCGAAGCGAC TCTGAGCAGT GACATTGACG GCCTTGTCAG CCTGTGCCGG
CAAACGGATG TAGGCGCAGC CTACCAGCGA CATTTGGCGC AGGTGTTGAC CAGTGACTTC
GAGCGCGATC TGGTCGCGGA CAAACGTTGC GAACTGGCGT TGGCGCTCGA GATAGCGGCC
ATGAAGCGCC AGCTGGGTGA CGATGAATTG CGCCTACTGC GCCAAGCGCT AGCGGGTACA
CCCATCACGC ACCCCCGTAG CACGCGCGTA GTGGTCGGTG GCCTGAAGGT GCTGGGGTGC
CGGGTGGATG GCGCGCTTGC ATTTGAACTG CTCTTTTCGT GGGGTAAACC CAGCAGCCCG
TTTCCGTCGC CGGAACAGAC TGTTGGGGTA TTGTTGTACC TGCCTGATGA TGTTGAGCAG
CCACTGCGTT ACTTCGATGG GTGGCAGGCG GCCAATCAGG CATTGGTCGC GGCTTTTGCA
AATGAAGGTT ACCGGCAGGG CATCGAGCGC CGTATCACCC TTGAAGACCG GGTGAAGTAC
ATGACATTGC TCGGGACGCG TCTGCTCGAT AGCAGCCCCG ATCTGGATCC CGCCGTGGAA
CGAGGTTCGG CTGCGGGAAT CAGTGACATG GCTGCCTGGC ACGTGCGGCG AATCAAGAGC
GACGCACGCT TTATGGCCGT ACCCACGGCA CAGGCCGATG CCGCCGCGGC TGCCCAGCGT
CTGAAGGACC TTGAAAGCGC AGGCCTTGCG CTGCTCGGCC TGGCGAGTTT TTTTGTGCCA
GGAATAGGCG AACTCTTGCT GCTTGACTGG GGGCGGCAGC TGCTTGGCCA CGTCTATGAG
GGCGTCAAGG ACTGGAGCCA AGGGCATCAG CACGAAGCCG TTGACCACCT GCTGCAACTG
GCCAGCGACC TTGCCGCCAC GGGGCTGGTG GCGGGAGGCG TCGCCCTTGC CCGCAGCCCG
TTTTTCGATG TGCTGGAGCC GGTCACCACC GAAGCGGGCG GGCAACGTTT GTGGCGATGC
GATCTGCAAC CCTACCGCCA GGCCAAGCCC AGCGAGCCGC TGATCGAGCA GGATAACGGG
TTGTACAGCG ATGGTAGCGG CCACTGGTGG CGTGACGAGC AGGGTTATTA CCGCGTGCGG
CAGGACGCCA GGGGGAACTG GCGTCTTTTG CATCGGGACG GCCATGATAC CTATGGGCCG
GCCTTGCGAG GCAATGGCGA ACGTGCTTGG CGCCTGACCT TCGAACGCCC ATTGGAATGG
CAGGGTGAGA CGAAGCTGCT GAGCCGTCTA TGGCCATCGG CAAGGGATTT GGGTAGCGAG
CGTGTTACGC AGATTCTCAA GGTTGCCGAT GTCGATGAGG CGCACCTGCG TGGCCTGTTG
GTGGAGGGGC GACGTCTGCC AGTCTGCTTG CGCGATACGC TGGAACGATT TTCGGTGGAT
GCGCGAGCAC AACGTTTCTT CCAGGCGATG ACGCCGAACG AAAGCGATAC TGAGCTCTGG
CAGTGGTGTG TCGATAGGCT GCAATTGGCA GGCTTGCCAC TGGATGAGCA GGTGGCTTCG
CTCCACGCGC GTGAAGTTAG CCTGCGAGGG CCGCTGCTGG AGCACTTCTC CACCCAGTAC
CTCGGCGATG ACGAGGCGCT GAGCCTGGTG AAAAGAGACT TTTCGACACT CCCTGATGCC
TATGCGCTCG AGGTGCTGCA ACAGGCCGAT GAAACGATGC GCACACGCAT GCGCACCGAA
GCGCGGCTGC CACTGGCCTT GATGGAGCGA GCGCGTAGCC TGCTACAGGA AGCCCGTCTG
GTCCGACTGC GCGAGGCGCT GCACCTGAGG GGCAGTTACC ACGCCGATGC AGTTGAACTG
CTGTTTGTGT TGCTACGACG ACATGGCCTG ACGCAGCTCC CGTTCAATCT GATACAGCGT
GACCAGTCCG AGAACGGTCG AGTGCTGGCG ATGCTGTTTC CCGAAACGCG GGGTCAGCGC
AGCCTGGTAC TGGTATGGCG AGAAGGCGCC TTCGATCTAT ACGACGAAAA CGGGCTGCGC
AGTGGGCTGG AAGCCGCCGA GCCACGAGGC ATCTTCGAAG TGTTGGCCGC TTGCCTTCCT
GAAGCCTATC GGCAGCGTCA GGGCTGGGTG GGTGATGATG TCCCGGCACG TATCCGGGCG
TCGATGCAAG GCTGGGTGCC AGCGCAACGG CAGGCGTTGC TGCGTCTGCT TGGCTGGCGC
GAAGCACGCC CGCTCGCGTC GTCCTTGCAG CGCCTTGCTG ACGGCCGGGT CGGTTACCTG
CTCAGTGGGC GGGCCACATC GTCAGTGCCG TCAGGGCAGG TCATGCGCCA GCGGATTCGC
AGCCTTTACC CAGCTTTCGA CGAGCAAGAG GTCGAGCGCT TCCTGCGGAC GCTCATGCGC
TCTGCTGGCT CGGCCTATTT GAGCCTGCTG CGCATGGAGC AGGAATATCA GCGCCTGGAT
GAGCATTTGC AAACCTGGAC GGAGGCCGTC TCGGCCCGTG CGAGAAACAC CCGGCAGGAG
GTTGCCGATG CTTTCCGGCG TGTCTGGCGG CTGGAGGGTG AGGAGGTAGT CGATGGCAAT
GGTGAGACGG CCGGCTTGCG CCTGAGTATC GTCGCGTGGT CGGTGGGGGA GCTGCCAAGC
ATACCCGCCG GTACCGACTT CGCTCATGTG ATCGACCTGC TGCTGGTGGG GTTGCGTCTG
GAGGCGCTGC CGCCAGGTTT TCTACGCAGC TTCCCTGCCG TGCGGCGTCT GGACCTGAGC
AACAATGCCT TGAGTGCGTT GCCTGAACAT CTAACCCAGC TGCGTGGCTT ACGGCACTTG
CATCTGCGGC GCAACAGGAT CCGTGTGGCG GCAAACCAGT CCAGTGCCTT GGCTGCTCTG
CCTGATTTGC GAACGCTTGA TCTGAGCGAG AATCCGTTGG GTGCAATCAG CCTTGATTTC
AATCAGTTGT CCCGTCTACG TGATTTGCGG CTGTTTCGTT GCGGCTTGCG GCGGGTGCCG
GCAGGGTTGG AGTGGTTGGG GATGCTGGAG CATGCCGATC TGCGCAACAA CCAGCTCAAC
GACCTGCCAG AGGCCCTGCT CAATGCCCCG GAACCTCTGC GTCGAGTAAT AGCTGTGCAA
GGGAACGCGT TGTCGGCGCA GGTCACCGAG CGCTTGTATG CTCAACCTGC ACACGTGGGC
GTAAGCGGCA ACAGGGTGGA GGTGAGGGAG GGTGAGGCTG GCTGGCTGGC TACCCTGGAG
GGGGAGGATA TTGAAAATCG ACGCCGCCAA TGGCAAGCAC TGCAGCGTGA GCCGGGAAGC
AATGCGTTCT TTCAACTGCT CGATGAGCTA ACCAGGAGCT CGGACTACCG TCTGGTGCGC
TCCGATCTAA GCCGACGTGT CTGGGCGATG GTCGAGGCGC TCAACCAGGA CACACGCATG
CGCGAGGAGC TGTTCGAACT GGCGGCCGAT CCGCGTACTT GCGTAGACAG TGTTGCCAGT
TGCTTCGGTC ATTTGGAGGT GCGCCAACAG GTGCTCCAGG CCACTGACGG GGGTGATCCG
TTGACCACAC GTGATGCGCG GCTGCTGTTG GCCCGGCGCC TCTTCCGGCT CGACCGGGTG
GAAGCGTTTG CGCGGCAGGA CTTCCAGTCC CGATCGCAAC TGGCGAATGC TGAAGACGTG
GACGAGGTGG AAGTCAGCCT TGCCTATCGC GTCGGGCTCT CGGTGCGGCT CGATCTGATC
GGGCAGCCAC GGACCATGCA GTTTCGCGCG ATTGCCGGGG TGAGCCGCAG TGACCTGGAC
AGGGTCTACC AAGCTGTGCA GGAGGCGGAA GCGAGTGACG AACTTGCGCT GTTCATCAGC
CAACGTGACT TCTGGTTGCC AGTACTGCGC GCGCAGCGGG CCGAAGATTT CGCGGCGTTG
GAGGAACAGT TCGACACGCA ACTGCAGGCA CTGGATGAGC GAAAGGAGAC GCTTGGCAGT
GCCGCGTACG TGCAACAAGC CAACCAGATA GGCAAGGACC GTGAAGTGGC GCTGAATGCA
TTGGCCCTGC GCTTGACTCG CGAAGCGCTG CTGGCGCGGC CGTGA
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| Protein sequence | MPQTQVNPKE QNADREFIAE QLPAWLSNAT PRQLNTLRSK VAAHHASQRR VAAVTRQLQP
LHTFAKQQLE QAMQARMGLT LDLDQATWRE ERRRLKIVQG TVREFTSYFV RVPALQKMMQ
NFKEAESFFS DTALVQAAQQ GASGEATLSS DIDGLVSLCR QTDVGAAYQR HLAQVLTSDF
ERDLVADKRC ELALALEIAA MKRQLGDDEL RLLRQALAGT PITHPRSTRV VVGGLKVLGC
RVDGALAFEL LFSWGKPSSP FPSPEQTVGV LLYLPDDVEQ PLRYFDGWQA ANQALVAAFA
NEGYRQGIER RITLEDRVKY MTLLGTRLLD SSPDLDPAVE RGSAAGISDM AAWHVRRIKS
DARFMAVPTA QADAAAAAQR LKDLESAGLA LLGLASFFVP GIGELLLLDW GRQLLGHVYE
GVKDWSQGHQ HEAVDHLLQL ASDLAATGLV AGGVALARSP FFDVLEPVTT EAGGQRLWRC
DLQPYRQAKP SEPLIEQDNG LYSDGSGHWW RDEQGYYRVR QDARGNWRLL HRDGHDTYGP
ALRGNGERAW RLTFERPLEW QGETKLLSRL WPSARDLGSE RVTQILKVAD VDEAHLRGLL
VEGRRLPVCL RDTLERFSVD ARAQRFFQAM TPNESDTELW QWCVDRLQLA GLPLDEQVAS
LHAREVSLRG PLLEHFSTQY LGDDEALSLV KRDFSTLPDA YALEVLQQAD ETMRTRMRTE
ARLPLALMER ARSLLQEARL VRLREALHLR GSYHADAVEL LFVLLRRHGL TQLPFNLIQR
DQSENGRVLA MLFPETRGQR SLVLVWREGA FDLYDENGLR SGLEAAEPRG IFEVLAACLP
EAYRQRQGWV GDDVPARIRA SMQGWVPAQR QALLRLLGWR EARPLASSLQ RLADGRVGYL
LSGRATSSVP SGQVMRQRIR SLYPAFDEQE VERFLRTLMR SAGSAYLSLL RMEQEYQRLD
EHLQTWTEAV SARARNTRQE VADAFRRVWR LEGEEVVDGN GETAGLRLSI VAWSVGELPS
IPAGTDFAHV IDLLLVGLRL EALPPGFLRS FPAVRRLDLS NNALSALPEH LTQLRGLRHL
HLRRNRIRVA ANQSSALAAL PDLRTLDLSE NPLGAISLDF NQLSRLRDLR LFRCGLRRVP
AGLEWLGMLE HADLRNNQLN DLPEALLNAP EPLRRVIAVQ GNALSAQVTE RLYAQPAHVG
VSGNRVEVRE GEAGWLATLE GEDIENRRRQ WQALQREPGS NAFFQLLDEL TRSSDYRLVR
SDLSRRVWAM VEALNQDTRM REELFELAAD PRTCVDSVAS CFGHLEVRQQ VLQATDGGDP
LTTRDARLLL ARRLFRLDRV EAFARQDFQS RSQLANAEDV DEVEVSLAYR VGLSVRLDLI
GQPRTMQFRA IAGVSRSDLD RVYQAVQEAE ASDELALFIS QRDFWLPVLR AQRAEDFAAL
EEQFDTQLQA LDERKETLGS AAYVQQANQI GKDREVALNA LALRLTREAL LARP
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