Gene PputGB1_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1833 
Symbol 
ID5869613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2056072 
End bp2056899 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content63% 
IMG OID641546950 
Productphosphonoacetaldehyde hydrolase 
Protein accessionYP_001668072 
Protein GI167032841 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01422] phosphonoacetaldehyde hydrolase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACA GCAACCCAAC CCAGCTGCAA GCCGCCATCC TCGACTGGGC CGGCACCGTG 
GTCGATTTCG GCTCCTTCGC TCCAACCCAG ATCTTCGTCG AAGCCTTCGC CGAATTCGAT
GTGCAGGTGT CCATCGAAGA AGCCCGTGGC CCGATGGGCA TGGGCAAATG GGACCATATC
CGCACCCTGT GCGACGTGCC GGAAATTGCC GAGCGCTACC GCAAGGTGTT TGGCCGTACC
CCGACCGACG ATGACGTCAC GGCCATCTAC AACCGCTTCA TGCCGCTGCA AATCGAGAAG
ATCGCCGTAC ATTCGGCACT GATCCCTGGT GCCCTTGAGA CCTTGACCGG TCTGCGCCAG
GACGGGCTGA AGATCGGCTC ATGCTCGGGC TACCCGAAAG TGGTCATGGA CAAGGTGGTG
GAACTGGCAG CACAGAACGG CTACGTGGCG GACCACGTGG TGGCCACCGA CGAAACCCCG
AACGGCCGGC CGTGGCCGGC CCAGGCCCTG GCCAACGTGA TCGCGCTGGG CATCGACGAT
GTAGCGGCCT GCGTGAAGGT CGACGACACC GTGCCAGGCA TTCTCGAAGG CCGCCGTGCC
GGCATGTGGA CCGTGGCGCT GGTGTGCTCG GGCAACGCGC TGGGGCTGAC CTGGGAAGGT
TTCCGGGCAC TGAGTGCCGA GAAACTGGAA GGCGAGCGTC AACGCATCCA TGCGCTGTTC
GCCGGTTCCC GCCCGCACTA CCTGATCGAC ACCATCAATG AACTGCCCGA AGTGATTGCC
GACATCAACC GGCGCCTGGC CAAAGGCGAG ATGCCGCAAA CCTTCTGA
 
Protein sequence
MNYSNPTQLQ AAILDWAGTV VDFGSFAPTQ IFVEAFAEFD VQVSIEEARG PMGMGKWDHI 
RTLCDVPEIA ERYRKVFGRT PTDDDVTAIY NRFMPLQIEK IAVHSALIPG ALETLTGLRQ
DGLKIGSCSG YPKVVMDKVV ELAAQNGYVA DHVVATDETP NGRPWPAQAL ANVIALGIDD
VAACVKVDDT VPGILEGRRA GMWTVALVCS GNALGLTWEG FRALSAEKLE GERQRIHALF
AGSRPHYLID TINELPEVIA DINRRLAKGE MPQTF