| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1801 |
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| Symbol | |
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| ID | 5869581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2021241 |
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| End bp | 2023325 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546918 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001668040 |
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| Protein GI | 167032809 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0471088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTACC CTGCGCAACG CTCGTTCAGC CATGGATTCG GTGTGCTGAC CCTGTCTACC
CTGCTCGCAG CCCCCCACGC CCTGGCCGAC CAGCCCACCA CTGCCGGCAG CTCGCAGCTG
GTGCTCACCC CCGTGCTGGT CAGCGGCGAA AAGGTCGAAC GTGACCTGCG CAACACCGCT
TCGTCGGTGT CGGTGAAAAG CGCCAGCGAA ATCGACAGCC TCAAGACCGG CAATGCCTCG
GTACACGAAG TGCTCAATGA CGTCCCCAAT GTGATCTACA CCGACACGGT GGGCGCGCCG
ATCATTCGCG GCCAGGACAC CCAGGGCCCG AACAACGGCG CCAACGTGTT CTGGGGCGGT
ACTGTGCCGC GCGCCACCAT CAACCTTGAC GGGCACTACC TGAACTACAA CGAGATGTAC
TTTGGCGCGC CATCGGTGTG GGACGTGGAC AGCATCGAGG TGTACCGCGG CCCGCAGACC
ACCAGCCAGG GTGCCAACGC CATTGCCGGC GCCATCGTGG TCAAGACCAA GGACCCGACG
TTCACCCCGG AGGCGGCCTA CCAGGCCGAG ATCGGCAGCT ACCACTCACG GCGCTCTTCG
CTGGCAGTCT CCGGCCCACT CAGCGACAAC CTGGCCGGGC GCCTGGCACT GGACTATGCA
GCGCGCGACA CCTTCATCGA CTACACCAAC CCCTCGTTTG CCAGCCACAA CACCGACCAG
GATTTCCGCG CCCTGAACCT GCGTGGCAAG CTGCTGTGGC TGCCTGATGC GGTGCCCGGC
CTGGGTCTGA AGTACACCTT CGCCCACGGC GACTCCAATC GCCCCACCCA GGAAGCAGCC
TCGCGGCCGT TCCACAAGCT GGACCACACC GGCGCCACCA TGCCCAGCTG GCACCAACAG
AGCAACACGC ACATCGTCGA CGTGGATTAC GAACTGGACA ACGGCATGAA GCTGTTCAAC
CAGACCCAGT ATTCGCTGTC CAACGTGCAT CGGGTGATTG GCGTGGCGAA CGGCGGAGAT
GCCGACATTC GCCAGAAAAA CTTCTCCAAC GAAAGCCGCA TCACCTTCGG CGAGCAACAG
GACACCCTCA GCGGTATGGC TGGCCTGTAC CTGGCGCGCA CCGACTCGGA CGAAATCCTG
TATTACGGCG GCATCTCGGA CTTCGACGAC ACCAAGCGCA ACCTGGGCGT ATTCGGTGAG
GTCAGCTACC GCCTCAATGA CCGCTGGACG CTCACCACTG CCCTGCGCCT GCAGCAGGAC
CAGATCCAGC GCAGCGGCAC TTCGCCGTTC GCCGCCAATG GGCTGGACTA CGACAAGACC
TTCACCGCGC TCCTACCCAA GGTGTCTTTG GCCTACGCCC TGACCCCGCA ATGGACCGTC
GGCGGCATGG TCAGCCGCGG CTACAACCCG GGTGGTGTGT CGCTCAACCT AAGCAGCAAG
CGCTTCGAGG CGTTCGACGA TGAGCGCATG TGGAACTACG AGCTGTTCGC CCGCGCCAGC
CTGCTGGACG ACCGCCTGCA CCTGAACGCC AACCTGTTCT ACATGGACAT GCAAGATGCC
CAGTACAACA TCCCGGTGGT GCTGGCCTCG GGCCTGACCC AGTCCTACAC CATCAACGCC
GAGAAGGCCC ATGCCTATGG CTTCGAGCTG TCGGCGGACT ACCGCGTGCT GGATAACCTG
ACCCTCAAGG CCAGCGCGGG TGCCCTGCAA ACCCGCATCG ACGACATCGA CGCCAACAAC
CGCTATGCCG GCAACGAATT TGCCCGTTCG CCCGGTTACA CCGTCAGCTT CGGCCCGAGC
TGGGACATCA CTGACCGCGT CAACCTCAAT GCCCAGGTGC GGCACATCGA CGGTTACTAC
TCGGACGTTG CCAACACCAA AAGCTATGCC ATCGACGGCT ACACCGTGGC CGACGCGCGC
ATGAGCTACC GCTTCAGCGA CCAGGTGCAG GTGTACACCT ACGTGAAAAA CGTGTTCGAC
GAACGCACCC CTACCTATAT GCAAACCAAC CGGGGGATAG GCGGTATCGA AGCGAGCATG
ACCGAGCCGC GTACCGTGGG AGTGGGTGTC AAAGGCGCCT TCTGA
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| Protein sequence | MKYPAQRSFS HGFGVLTLST LLAAPHALAD QPTTAGSSQL VLTPVLVSGE KVERDLRNTA
SSVSVKSASE IDSLKTGNAS VHEVLNDVPN VIYTDTVGAP IIRGQDTQGP NNGANVFWGG
TVPRATINLD GHYLNYNEMY FGAPSVWDVD SIEVYRGPQT TSQGANAIAG AIVVKTKDPT
FTPEAAYQAE IGSYHSRRSS LAVSGPLSDN LAGRLALDYA ARDTFIDYTN PSFASHNTDQ
DFRALNLRGK LLWLPDAVPG LGLKYTFAHG DSNRPTQEAA SRPFHKLDHT GATMPSWHQQ
SNTHIVDVDY ELDNGMKLFN QTQYSLSNVH RVIGVANGGD ADIRQKNFSN ESRITFGEQQ
DTLSGMAGLY LARTDSDEIL YYGGISDFDD TKRNLGVFGE VSYRLNDRWT LTTALRLQQD
QIQRSGTSPF AANGLDYDKT FTALLPKVSL AYALTPQWTV GGMVSRGYNP GGVSLNLSSK
RFEAFDDERM WNYELFARAS LLDDRLHLNA NLFYMDMQDA QYNIPVVLAS GLTQSYTINA
EKAHAYGFEL SADYRVLDNL TLKASAGALQ TRIDDIDANN RYAGNEFARS PGYTVSFGPS
WDITDRVNLN AQVRHIDGYY SDVANTKSYA IDGYTVADAR MSYRFSDQVQ VYTYVKNVFD
ERTPTYMQTN RGIGGIEASM TEPRTVGVGV KGAF
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