Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1685 |
Symbol | |
ID | 5869465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1906959 |
End bp | 1907498 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546802 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001667924 |
Protein GI | 167032693 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.417261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0902788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATC TCGATCTGCT GCACATCTCC CTTGCTGATC AATGCCTGTA CGGTTTTGCC CGTGGCCAGC TGCGCGTGCG TGTGCCGGTT TCCACGGCGC GCAACGGTGC CGGTGAGCGC AATGGTTCAG GCTGCACGCC GCGTGGCATG CATCAGGTGC GGGCGAAGAT TGGCGCGGGG CTGCCGCTGA ATGCGGTATT GGTCGGGCGG CGCTGGGCTG GAGAGGTGTG GTCGCCGGAG TTGCATGCGA AAAATCCAGA TCGCGACTGG ATCCTCACTC GCATCCTCTG GCTCAGCGGC TGTGAACCCG GTGTCAACCG CCTGGGCGCG GTCGATACGT TTCGCCGCTA TATCTACCTG CACGGCACCC CTGACACGGA ACCCATGGGT ATAGCGTTGT CCCATGGCTG CATACGCCTG CGCAACACCG ACTTGCTAAG CCTGTTCGAG CGGGTGCCGG CCCATTGCCC GGTACGTATC GAGCAAGCCG CCTGCCCCCA GTGGGCGTCT CTGAAGTTTT CAATGAAGGA TTACCCATGA
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Protein sequence | MPDLDLLHIS LADQCLYGFA RGQLRVRVPV STARNGAGER NGSGCTPRGM HQVRAKIGAG LPLNAVLVGR RWAGEVWSPE LHAKNPDRDW ILTRILWLSG CEPGVNRLGA VDTFRRYIYL HGTPDTEPMG IALSHGCIRL RNTDLLSLFE RVPAHCPVRI EQAACPQWAS LKFSMKDYP
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