| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1454 |
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| Symbol | |
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| ID | 5869224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1623599 |
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| End bp | 1624681 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546563 |
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| Product | fimbrial protein |
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| Protein accession | YP_001667697 |
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| Protein GI | 167032466 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.118343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA CCCATCGCCT CACCCTGCTA TCCACCTTGC TGCTGGTCAG CCTGCCCTTC
ATTCACCTGC CGGCTGCCCA CGCTGCGTCA GGCTGCGTCA TCAACAATGG CCCAGGCCCT
GCCACCTTCA CGGCAGATTT CCAGAATGTG TGGGTGCCCA GGGACTTGCC GATCGGCGAC
CAAATCACTC GACTGCGGGT TCCCGTGACC TCCGACCCGG CAAACAGGGC TGTCTCTTGT
CACAACAGCT CCGATCGCCT TCTGGAAGCG CAAGCCGACT ACACCGCGCC GTTTGCCTAC
GATGTGCCAG TGCGACTTGG CAGCGGGCGC TTCGCCAATA GCATCATCAG AACCCGGACC
CCGGGGGTTG GTGCCGTCAT CGAACTGGGC CACCCGTTCA GCGGCGGGGC ACCCAATACG
TTCAGCTCAA GCACGGGCGA CACCTTCCTG CCTTACCGCG GCACCAACAT GGCCAGCATG
GCCATCCCGA TCCTGATCGG TCCGATCAGC ATGACCGTCA CACTGGTCAA GATCGGGGCC
ATGGCGCCCG GGCCAGTCTT GCTGGATGAA GAAGTAGCCC GTGGCAGCAC CTCAGATCAG
CCTGACGCCT TCCGCCTGCG AATCAGCGGC AACCTGAACC AGGCACAGTG CACATTGAAA
AGCGATGCGG TCAGTGCCGA CCCGGTCGAT CTGGGCAGCC ATACCGTGGC GGACTTCCCG
GGCAGGGGCA GCACCACGAC CAGCATGCCG TTCCATATCA CCCTGAGTGA CTGCGAGGAC
GACCCCAACT CAAGTACCGC TACGGCCTAT ATCTACCTGA CAGGCACCGA TGGCTCGGCC
GCCATCGACC CTAAACTGGG CCTGTTCAGC TTGGGCAACG GTTCGACGGC GACCGGTATT
GGCATCCAGA TAACCGATGA CAGTGGTGTT CCCGTGCCAT TGGCAGAGCA CGTATCGACC
AACCAGAGGC TTCAGCTGCC TGTAACCCGC CTGCCTTATC GTGCGCACTT CTACCAGACG
AACGATCGGG TGACCCCTGG CGTGGCAAAG GGCGCGCTCG ATTTCACCAT CAGTTATCGC
TGA
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| Protein sequence | MNATHRLTLL STLLLVSLPF IHLPAAHAAS GCVINNGPGP ATFTADFQNV WVPRDLPIGD
QITRLRVPVT SDPANRAVSC HNSSDRLLEA QADYTAPFAY DVPVRLGSGR FANSIIRTRT
PGVGAVIELG HPFSGGAPNT FSSSTGDTFL PYRGTNMASM AIPILIGPIS MTVTLVKIGA
MAPGPVLLDE EVARGSTSDQ PDAFRLRISG NLNQAQCTLK SDAVSADPVD LGSHTVADFP
GRGSTTTSMP FHITLSDCED DPNSSTATAY IYLTGTDGSA AIDPKLGLFS LGNGSTATGI
GIQITDDSGV PVPLAEHVST NQRLQLPVTR LPYRAHFYQT NDRVTPGVAK GALDFTISYR
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