| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1419 |
|---|
| Symbol | |
|---|
| ID | 5869183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1588374 |
|---|
| End bp | 1589174 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546522 |
|---|
| Product | cytochrome c |
|---|
| Protein accession | YP_001667662 |
|---|
| Protein GI | 167032431 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.768311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCACT GCCTTGCCCT GTTAGCGTTG CTCCTGAGCC TGCCACTGTC GGCGGCGCAA
CTGCACCTTG AACTGGGCGT CAATACGCGC CAGTGGAGCA GCGCCGAACT GCTTGACCAC
CCGCAAACCC GGGATATCAG CATTGAGCAG GATGTTTCCT ATAAACGCCC TATGCGCTAC
CGGGCAGTGC CGCTGGCCAC GCTGTTGGAG GGCGTGATCG CAAGCGATCA CCTGCAGGCC
GTGGCGCTGG ATGGATTTGC CGCCGAGATG CCCGCTGCGC CACTGCTGCA GCAAGGGCCG
GCACGGGCCT GGCTGGCCGT GGAGGACCCC GGCAAGCCGT GGCCGCCACT GGGCCAGGGC
AAGCCAAGCG CGGGGCCGTT CTACCTGGTG TGGACTGCAC CAGAGGCCAG CGGCATCCGG
CCGGAACAGT GGCCGTTTCA GGTGTCCACT CTGCGCAAAC TGGCCCCGGT GGAACAGCGT
TTTCCCGCAT TGCTGCCCGA CCCGAAGCTG CCAGCCGACA ACCCTGTGCG TCAGGGCTTT
GCGTTGTTTC AGCAGAACTG CCTGGCATGC CACCGGCTGA ACGGCGCGGG GGACGCGCAG
GTGGGGCCGG ATTTGAATGT GCCGCACAAC CCGACCGAGT ATTTTCAACC CGCCTATCTA
CGCAAGTTGA TACGTGACCC GCAGAGCCTG CGACGGTGGC CGCAGGCGAA AATGCCTGGG
TTTGCCGAGA GTGTTTTGAG CGAGCAGGAG TTGGATGCGC TGTTGGCCTA TTTGGGGCAT
ATGGCTGGGC GCAGGCCCTG A
|
|---|
| Protein sequence | MRHCLALLAL LLSLPLSAAQ LHLELGVNTR QWSSAELLDH PQTRDISIEQ DVSYKRPMRY
RAVPLATLLE GVIASDHLQA VALDGFAAEM PAAPLLQQGP ARAWLAVEDP GKPWPPLGQG
KPSAGPFYLV WTAPEASGIR PEQWPFQVST LRKLAPVEQR FPALLPDPKL PADNPVRQGF
ALFQQNCLAC HRLNGAGDAQ VGPDLNVPHN PTEYFQPAYL RKLIRDPQSL RRWPQAKMPG
FAESVLSEQE LDALLAYLGH MAGRRP
|
|---|
| |