| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1368 |
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| Symbol | |
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| ID | 5869132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1529343 |
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| End bp | 1530386 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641546471 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001667611 |
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| Protein GI | 167032380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3765] Chain length determinant protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0128596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGCG AGCAATACCG CGGTGGTGAG GAAGTTGATC TGGGTGAGCT GTTTAAAAGC
GTGTGGGCGC AAAAGGTTTT GATAGCCGGA TTAACACTCG CGTTGTTGTT GCTGGCAGCA
CTTTACGCGT TTACACGTCA ACCTGTATAT CAGGCCGATC TTGCGATCGT TGCGCCCTCT
CATAATGATA TTTCCCTCAT TAATTATGGG CGTGGTGAGG CTACCGGCTT GGCGGTGATT
ACAGTCAAGG ATGTGTATGA GCTATATGCG CGTCATCTGT ATTCGGAAAA TGCGCGACGG
AAGGTATTCG AGGAAATCTT CTTTCCTTCG CTTTCTGAAA GCCAGAAAGC ACAGCCGCAG
AATGTATTGT TTACGCGATT CTCTCGCTTG TTTGTGATTA GCAAGACGGG TGATGACGCT
GCTGCGCGCT ATGTGGTCAG TGTCTCTGAT TCTGAGCCTG CAGCAGCAGT GAAGTTGGCA
GATGCGCTCG CGAATACCGC TGCTGAAATG ACCAAGAGCG AACTAGTAAA AAATGCCCTT
TCAGATGCAT CTATGCGCGC AGTCATGTTG GATAAAGAAA TATCCGGGAA GCGTGAGGTC
GCGCGCAAAG AGCGAGAAGA CCGACTGATT AAATTGAAGG AAGCGCTGTC AATTGCTTTG
TCAGTCGGTT TGAGGAAGCC CCCTATTATT ACGGGTAGTG CTTCGGAGTT GTCGGCACGG
ATGGATGGTG ATCTTGCATA CATGCGTGGT AGCGAAGCGA TTCGGGCCGA AATTAATAAT
ATGGCGATGC GTCAGTCTGA CGATCCATAT ATTGCCAATT TACGTCAGCT TGAAGAGCGC
ATGGCATTTT ATCGTGATTT GAAAATCAAC GAGGATGCCT TCCGTGTTTA TCAGCGGGAT
GGTGTGCTTG CAGTGCCGGA CCAACCTATT AAGCCGAGGA AGGTTTTGAT TATGCTGGGT
GGGCTGGTAT TGGGCGCTGG TTTGGGAGTA TTCGTTGCAC TAATTCGTTT TTTTGTGCGC
GGGAAGAAAG CGCGGTTTGC ATGA
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| Protein sequence | MASEQYRGGE EVDLGELFKS VWAQKVLIAG LTLALLLLAA LYAFTRQPVY QADLAIVAPS
HNDISLINYG RGEATGLAVI TVKDVYELYA RHLYSENARR KVFEEIFFPS LSESQKAQPQ
NVLFTRFSRL FVISKTGDDA AARYVVSVSD SEPAAAVKLA DALANTAAEM TKSELVKNAL
SDASMRAVML DKEISGKREV ARKEREDRLI KLKEALSIAL SVGLRKPPII TGSASELSAR
MDGDLAYMRG SEAIRAEINN MAMRQSDDPY IANLRQLEER MAFYRDLKIN EDAFRVYQRD
GVLAVPDQPI KPRKVLIMLG GLVLGAGLGV FVALIRFFVR GKKARFA
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