| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1305 |
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| Symbol | |
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| ID | 5869069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1460309 |
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| End bp | 1461241 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546408 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001667548 |
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| Protein GI | 167032317 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000111615 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.494502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG ATACCCGCAT TAAATACCGC CACCTGCTGT GCTTCCTGGA GATTGCCCGG
CAGGGCAGCC TGGCCAGGGC TGCCGACGTG CTTGCGATCA GCCAGCCGGC CATCTCCAAA
ACCCTCAAGG AACTTGAAGA CCTGTTGGAG GCGCGCTTGT TCGCGCGCAG CCGTCAGGGT
GTCGAGCTGA CCCCCGCCGG GACGCGCTTC ATGCGTTATG CCGGGCCCAG CGTGCAGGCC
CTGCGCGATG GTGTCAGCAG TTTGCGTGGC GAAGCGCGGG CGCCGTCACA GGTGCGTATA
GGCGTGCTGT CCACGGTCGA GGGCCTGCTC ATGCCCGAGG TGTTGTGCCG CCTGCACCAG
CGCCATGACG CGCTGGTGAT CAGTGTGGTC ACCGGGGTCA GTGCTCAGCT GCTCGGCCAA
CTGCACCTGG GCGAACTGGA GCTTGTGGTC GGGCGCATGA CCGACAGCCC GCAGATCCAG
GGCCTGTCGT TCGAGCACCT GTACAGCGAA TCGATGAGCC TGGTGGTACG CCCCGGTCAC
CCGCTGCTGG CCAGCGCGCC GGTGGAGCGA GCCCAGGTGG GGCGTTACCC GTTGGTGCTG
CCACCGGCGG GCACCACCAT CCGCCAGCAT GCCGACAGCC TGTTTGTGCA ATGCGGTATC
CAGATGCCGG CGCAGCGCCT GGAAACCTTG TCGCTGGCCC TGAGCCGGCG TTACCTGCTG
GGCAGTGATG GACTGTGGGT GGCGCCCCGC GACGCGGTCT TGCTGGACCT GCGCCATGGC
GAGTTGGTCG AGCTCGACCT GGGCGTGCGC GAGCCGGGCG GTTCGGTCGG CATCTGCCGT
AACGCCGCCC TGCCGCAAAG CTTGCCGGGG CAATGGGTGT GCGAGGTACT GCGTGAGGTG
GCAGGGGAGT ATCGCGAGGG TCAATACCCC TGA
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| Protein sequence | MNLDTRIKYR HLLCFLEIAR QGSLARAADV LAISQPAISK TLKELEDLLE ARLFARSRQG
VELTPAGTRF MRYAGPSVQA LRDGVSSLRG EARAPSQVRI GVLSTVEGLL MPEVLCRLHQ
RHDALVISVV TGVSAQLLGQ LHLGELELVV GRMTDSPQIQ GLSFEHLYSE SMSLVVRPGH
PLLASAPVER AQVGRYPLVL PPAGTTIRQH ADSLFVQCGI QMPAQRLETL SLALSRRYLL
GSDGLWVAPR DAVLLDLRHG ELVELDLGVR EPGGSVGICR NAALPQSLPG QWVCEVLREV
AGEYREGQYP
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